Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 656 a.a., macrolide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  118 bits (295), Expect = 6e-31
 Identities = 100/409 (24%), Positives = 195/409 (47%), Gaps = 31/409 (7%)

Query: 3   ITDVVSFAGRNITQKKTQSFLTIIGVVIGILAIVSLISLGFGVQNYITSEITTIGANVIS 62
           + D V  A R +   + ++ LT++G++IG+ ++V ++++G G +  + +++   G+N+I 
Sbjct: 265 LVDAVQAAWRVMWINRFRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAFGSNIIY 324

Query: 63  VL-PSQNFGGPAVSKNFND-NDVSAVRNVRGVEEVVAAWFGSYELEYRDQSHYGNVLVIE 120
           +   S N   P      +D + ++A+  V+ +  V  +  G         ++ G      
Sbjct: 325 LSGTSPNPRTPLGIVTLDDVHALAALPQVQRIMPVNGSEVGVRFSNVDYMAYVGG----N 380

Query: 121 PSKFTHVYSKTWGYEPYKGRWIEDSDKYSC----MIGYALATNSFDREID-IGDKITIND 175
            + F  +++    +   +G +   +D+ +     +IG+ +    F  E++ IG  I I +
Sbjct: 381 DTNFPEIFN----WPVVEGNYFTAADERAAATVAVIGHRVREKLFKGEVNPIGQYILIEN 436

Query: 176 KKYKVIGILEE----TGNPRTENSVILSKDVGE-ELF-EINNEYNMMIVS-VRSGEDVNL 228
             ++VIG+L E    +GN  +++ V +        LF   N EY ++  +  R   +  +
Sbjct: 437 VPFQVIGVLAEKGAASGNKDSDDRVAIPYTAASVRLFGNYNPEYVVIAAADARKVRETEV 496

Query: 229 VSEEIKDELEDSRGDENFSVLTAEQLAESINSIFEVLTIFLVGVAGISLLVGAVGISNTM 288
             +++  +L + + D   +   A   AE+       L++ L  +A ISLLVG +G+ N M
Sbjct: 497 AIDQLMQKLHNGKRDYELTNNAAMIQAEARTQ--NTLSLMLGSIAAISLLVGGIGVMNIM 554

Query: 289 HMSILERRKDIGILKALGAENTTILSIFVVEAGFLGLFGGIVGTMLGILIAKAIEYIAAI 348
            M++ ER ++IGI  A GA    IL  F+ EA  L + GG+ G  L +L+   +      
Sbjct: 555 LMTVRERTREIGIRMATGARQRDILRQFLTEAVMLSVVGGLCGIALALLVGGVLVLAKVA 614

Query: 349 SGYGLIRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397
             + L+        + G    + V G++ G+ PAR  A+L+PV  L  E
Sbjct: 615 VQFSLL-------AVFGAFGCALVTGVVFGFMPARKAARLDPVKALTSE 656