Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 405 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  110 bits (274), Expect = 9e-29
 Identities = 94/395 (23%), Positives = 177/395 (44%), Gaps = 38/395 (9%)

Query: 20  QSFLTIIGVVIGILAIVSLISLGFGVQNYITSEITTIGAN-VISVLPSQNFGGPAVSKNF 78
           +S L ++G+VIG  ++V+LI++G             +G + +I+  P +      +    
Sbjct: 32  RSILALLGIVIGSSSVVALINIGHNAAVDAAMIFKDMGTDTLIAQFPPKGASTVPMPARL 91

Query: 79  NDNDVSAVRN-VRGVEEVVAAWFGSYELEYRDQSHYGNVLVIEPSKFTHVYSKTWGYEPY 137
              D+ AVR  V G+  V A    S  + +  ++   N++   P                
Sbjct: 92  ---DLDAVRQTVPGIAHVGALTLFSGPIVFHGRTVNANLVGSTPD-----IKDAMRLALQ 143

Query: 138 KGRWIE--DSDKYSCMIGYALATN--SFDREIDIGDKITINDKKYKVIGILEETGN---- 189
           +GR++   D+++   +IG  +A +  +    + +GD++ IND  + ++GIL         
Sbjct: 144 QGRFLSGFDANETYGVIGDQVAQSLGAPGDPLRLGDRVRINDYLFLIVGILRSQPRAMLM 203

Query: 190 PRTENSVILSKDVGEELFEINNEYNMMIVSVRSGEDVNLVSEEIKDELEDSRGDENFSVL 249
           P   N  +     G        +   +I+    G+D+  +++ +   L+    D +  + 
Sbjct: 204 PVQANESLFIPAEGMRRIYATPQIGNLIIRAAPGQDMERIAKNVAVALQPQLTDHDVDIQ 263

Query: 250 TAEQLAESINSIFEVLTIFLVGVAGISLLVGAVGISNTMHMSILERRKDIGILKALGAEN 309
             +Q+ + +          L+ +  ISL+ G VG+ N M M++ ERR++IGI  ALGA  
Sbjct: 264 VPQQMIDGMTRQSRTFAYLLLALGAISLVGGGVGVMNVMLMNVSERRREIGIRMALGARQ 323

Query: 310 TTILSIFVVEAGFLGLFGGIVGTMLGILIAKAIEYIAAISGYGLIRAWIS-WELIVGVLV 368
             I ++F++EA  L   G + G +LG+  A              + AW+S WE  + +  
Sbjct: 324 RDIRNLFLLEAVTLTAVGALCGAVLGLTAA-------------WLYAWLSGWEFALAIAA 370

Query: 369 F------SFVVGILSGYFPARSGAKLNPVDTLRGE 397
                  + +VG+  G +PA S ++L PV+ LR E
Sbjct: 371 LPLGVGSTLLVGLFFGIYPAVSASRLQPVEALRDE 405