Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 669 a.a., Macrolide export ATP-binding/permease protein MacB from Variovorax sp. SCN45

 Score =  140 bits (354), Expect = 8e-38
 Identities = 100/409 (24%), Positives = 191/409 (46%), Gaps = 26/409 (6%)

Query: 2   RITDVVSFAGRNITQKKTQSFLTIIGVVIGILAIVSLISLGFGVQNYITSEITTIGANVI 61
           R  +    A R++   + ++ LT++G++IGI ++VS++++G G + ++ S+I  IG N +
Sbjct: 274 RFAEAFRMAWRSMMAHRMRTALTMLGIIIGITSVVSIVAIGEGAKRFVLSDIKAIGTNTL 333

Query: 62  SVLPSQNFGGPAVS--KNFNDNDVSAVRNVRGVEEVVAAWFGSYELEYRDQSHYGNVLVI 119
            V P  +FG    +  +    +D+ A+     V  V  +   +  L YR     G+V  +
Sbjct: 334 DVYPGSDFGDDKAASIRTLTPSDLDALAAQPYVHSVTPSTSRNLRLRYRSVDINGSVNGV 393

Query: 120 EPSKFTHVYSKTWGYEPYKGRWIEDSD----KYSCMIGYALATNSFDREID-IGDKITIN 174
             S F     +    +   G     SD        +I        F    D +G  I + 
Sbjct: 394 SDSFF-----RVRDIQMASGAAFTASDVRHQSQVVVIDQNTRRKLFPEGTDPLGKIILVG 448

Query: 175 DKKYKVIGILEETGNPRTEN---SVILSKDVGEELFEINNEYNMMIVSVRSGEDVNLVSE 231
           +    VIG+ +E  N   EN   ++ L    G         ++ + V +R  +      +
Sbjct: 449 NLPCTVIGVSQEKKNMFGENKSLNIWLPYSTGASRLFGQQHFDSITVRIRDDQPTKAAED 508

Query: 232 EIKDELEDSRGDENFSVLTAEQLAESINSIFEVLTIFLVGVAGISLLVGAVGISNTMHMS 291
            +   L    G ++F     + + ++     + LT+ L  +A ISL+VG +G+ N M +S
Sbjct: 509 SVVKLLTMRHGSKDFFTFNMDSIVKTAERTSQSLTLLLSLIAVISLVVGGIGVMNIMLVS 568

Query: 292 ILERRKDIGILKALGAENTTILSIFVVEAGFLGLFGGIVGTMLGILIAKAIEYIAAISGY 351
           + ER ++IGI  A+GA  + +L  F+ EA  + L GG++    G+ ++  I ++ ++   
Sbjct: 569 VTERTREIGIRMAVGARQSDVLQQFLTEAVLVCLVGGLI----GVTLSYGISFLFSL--- 621

Query: 352 GLIRAW---ISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397
             ++ W    S   +V   + + ++G+L GY PAR+ A+L+P++ L  E
Sbjct: 622 -FVKQWQMIFSMGAVVSAFLCASLIGVLFGYLPARNAARLDPIEALARE 669