Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 657 a.a., Macrolide export ATP-binding/permease protein MacB 2 from Pseudomonas protegens RBAN4

 Score =  112 bits (281), Expect = 2e-29
 Identities = 91/402 (22%), Positives = 187/402 (46%), Gaps = 17/402 (4%)

Query: 3   ITDVVSFAGRNITQKKTQSFLTIIGVVIGILAIVSLISLGFGVQNYITSEITTIGANVIS 62
           + + +  A R +   + ++ LT++G++IG+ ++V ++++G G +  + +++   G+N+I 
Sbjct: 266 LLEAIQAAWRVMWINRFRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAFGSNIIY 325

Query: 63  VLPSQNFGGPAVSKNFND-NDVSAVRNVRGVEEVVAAWFGSYELEYRDQSHYGNVLVIEP 121
           +  S     P   +     +DV+A+ N+  V+ ++A       + + + + Y + +    
Sbjct: 326 L--SGYSPNPRTPEGIVTLDDVAALANLPQVKRIMAVNGAKAGVRFGN-ADYMSYVGGND 382

Query: 122 SKFTHVYSKTWGYEPYKGRWIEDSDKYSCMIGYALATNSF-DREIDIGDKITINDKKYKV 180
           + F  +++       Y     E S     +IG+ +      D    IG  I I +  ++V
Sbjct: 383 TNFPEIFNWPVAQGSYFSEADERSAAAVAVIGHKVREKLLKDVANPIGQYILIENVPFQV 442

Query: 181 IGILEETG--NPRTENSVILSKDVGEELFEINNEYNMMIVSVRSGED--VNLVSEEIKD- 235
           +G+L E G  +  +++   ++         +  ++N   V++ + +   V    +EI + 
Sbjct: 443 VGVLSEKGASSGDSDSDDRIAVPYSAASIRLFGDHNPQYVAIAAADASRVKQTEQEIDEL 502

Query: 236 ELEDSRGDENFSVLTAEQLAESINSIFEVLTIFLVGVAGISLLVGAVGISNTMHMSILER 295
            L    G  +F +     + ++       L++ L  +A ISLLVG +G+ N M M++ ER
Sbjct: 503 MLRMHGGKRDFELTNNAAMIQAEARTQNTLSLMLGAIAAISLLVGGIGVMNIMLMTVRER 562

Query: 296 RKDIGILKALGAENTTILSIFVVEAGFLGLFGGIVGTMLGILIAKAIEYIAAISGYGLIR 355
            ++IGI  A GA    IL  F+ EA  L + GG+ G  + ++I   +        + L  
Sbjct: 563 TREIGIRMATGARQRDILRQFLTEAVMLSVVGGLAGIGVALIIGGILILSEVAVAFSLAA 622

Query: 356 AWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397
                   +G    + V G++ G+ PAR  A+L+PV  L  E
Sbjct: 623 G-------LGAFACALVTGVIFGFMPARKAARLDPVTALTSE 657