Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 414 a.a., ABC transporter from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  122 bits (306), Expect = 2e-32
 Identities = 108/411 (26%), Positives = 203/411 (49%), Gaps = 33/411 (8%)

Query: 12  RNITQKKTQSFLTIIGVVIGILAIVSLISLGFGVQNYITSEITTIGANVISV----LPSQ 67
           R I     ++ LT + + IGI+++V +++    ++  +T   + +GAN   +    + ++
Sbjct: 12  RAIRSNLLRTILTGLIISIGIMSLVGILTAVDSMKYSLTQTFSNLGANAFDIRRKGMNNR 71

Query: 68  NFGGPAVSKNFNDNDVSAVRNVRGVEE------VVAAWFGSYELEYRDQSHYGNVLVIEP 121
                 V K +   D +  R  + V +      + A   G+  ++   +    N+ V+  
Sbjct: 72  GSREGRVEKVYPQIDYNQARQYKEVMKDEARVSLSAFISGATIVKSESEKTNPNISVVAA 131

Query: 122 SKFTHVYSKTWGYEPYKGR----WIEDSDKYSCMIGYALATNSFDREIDIGDKITINDKK 177
            +    Y         KGR    + ++      +IG  LAT  F  +  IG+ IT   ++
Sbjct: 132 DED---YMLNNNLNLAKGRDFSTFEQEQGTNVAIIGDELATTLFKNKDAIGEYITFLGRR 188

Query: 178 YKVIGILEETGNPR---TENSVILSKDVGEELFEINN-EYNMMI-VSVRSGEDVNLVSEE 232
           +KV+G +E+ G+     ++  V++  + G ++    N E N  I  ++    ++N V  E
Sbjct: 189 FKVVGQMEKAGSSMGGSSDRRVLIPLETGRQIPRTGNAELNFDIKTAIFRANELNYVMGE 248

Query: 233 IKDELEDSRGD-----ENFSVLTAEQLAESINSIFEVLTIFLVGVAGISLLVGA-VGISN 286
              ++ + R D     ++F +  ++ L +S++ I   L  +  GV G   L+GA VG+ N
Sbjct: 249 ATGKMRNIRQDALGQEDSFEIRRSDSLVQSLDEISGYLK-WGGGVIGFITLLGASVGLMN 307

Query: 287 TMHMSILERRKDIGILKALGAENTTILSIFVVEAGFLGLFGGIVGTMLGILIAKAIEYIA 346
            M +S+ ER ++IG+ KALGA    I   F++EA  + + GG++G +LG+L+   I  + 
Sbjct: 308 IMMVSVNERTREIGVRKALGATAHQIRQQFLIEAIVICILGGLLGILLGVLMGNGIALLI 367

Query: 347 AISGYGLIRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397
           A  G G    W+ W + VG L    +VG++SGY+PA   +KL+P+++LR E
Sbjct: 368 A-DGAGFFVPWL-W-VFVG-LTICVLVGVISGYYPAFKASKLDPIESLRYE 414