Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 667 a.a., Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  134 bits (336), Expect = 1e-35
 Identities = 102/408 (25%), Positives = 198/408 (48%), Gaps = 27/408 (6%)

Query: 3   ITDVVSFAGRNITQKKTQSFLTIIGVVIGILAIVSLISLGFGVQNYITSEITTIGANVIS 62
           + +    A R +     ++ LT++G+VIG+ ++++++++G G +  +   I+ +G+N++ 
Sbjct: 274 VVEAAKTALRALRANVFRAILTLLGIVIGVASVIAMLAIGDGAKQVVIDRISAMGSNLLL 333

Query: 63  VLP-SQNFGGPAVSKNFNDNDVSAV-RNVRGVEEVVAAWFGSYELEYRDQSHYGNVLVIE 120
           V P + N  G   +      DV+A+ + V  V   V     +  L Y  +S Y + ++  
Sbjct: 334 VRPGAPNQRGFQNTATLVLADVNAIDKEVPNVLAAVPEQSSNATLRY-GESDYSSSILGT 392

Query: 121 PSKFTHVYSKTWGYEPYKGRWIEDSDKYS----CMIGYALATNSFDREID-IGDKITIND 175
            SKF    ++ W  +  +G +  D D+       ++G  +A   F  + + +G  + +N+
Sbjct: 393 SSKFP--LARQWKVQ--RGTFFTDEDEQEYATVAVLGQTVAKALFPGDEEPLGKYVLVNN 448

Query: 176 KKYKVIGILEETG---NPRTENSVILSKDVGEELFEINNEY-NMMIVSVRSGEDVNLVSE 231
             ++V+G++   G   N + ++ V+L      +L      +   + V+V     ++    
Sbjct: 449 LIFQVVGVMSTRGASPNGQDQDDVVLVPYATSQLRLSGQRFLRNVTVAVSDVSRIDETQS 508

Query: 232 EIKDELEDSRGDENFSVLTAEQLAESINSIFEVLTIFLVGVAGISLLVGAVGISNTMHMS 291
            ++  L +  G  +F +     + ++       +TI L  +A ISLLVG +G+ N M +S
Sbjct: 509 AVESLLAERHGVIDFQIRNMASIIDTATETQNTMTILLGSIAAISLLVGGIGVMNIMLVS 568

Query: 292 ILERRKDIGILKALGAENTTILSIFVVEAGFLGLFGGIVGTMLGILIAKAIEYIAAISGY 351
           + ER ++IGI  A GA    IL  F++EA  +   GG+VG ++G+ +A  I         
Sbjct: 569 VTERTREIGIRMATGARMRNILQQFLIEALVVSALGGLVGVVIGLGVAFVI--------- 619

Query: 352 GLIRAWISWELIVGVLVF--SFVVGILSGYFPARSGAKLNPVDTLRGE 397
           G     + + +   VL F  +F  G++ GY PAR  A+L+PV  L  E
Sbjct: 620 GATGTAVQFSVTPVVLAFGCAFATGLIFGYLPARKAARLDPVVALSSE 667