Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 415 a.a., ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score = 81.3 bits (199), Expect = 5e-20
 Identities = 97/432 (22%), Positives = 181/432 (41%), Gaps = 66/432 (15%)

Query: 7   VSFAGRNITQKKTQSFLTIIGVVIGILAIVSLISLGFGVQNYITSEITTIGANVISVLPS 66
           +S A +++  ++ Q+ ++++GV +G+   + + ++  G Q    + I  +  ++I     
Sbjct: 6   LSIALQHLRHRRRQTLVSLLGVSLGVAFFIGISAMMQGFQRDFIARIIDVQPHIIVKDEV 65

Query: 67  QNFGGPAVSKNFNDNDVSA--------VRNVRGVEEVVAAWFGSYELEYRDQSHY----- 113
           +     AV + + D  VS         VR +RG   ++A       LE     H      
Sbjct: 66  RAAPKQAVERAYPDGAVSLRGLKPREEVRGIRGARNMLAT------LEEMPGVHVAPALS 119

Query: 114 GNVLVIEPSKFTHVYSKTWGYEPYKGRWIEDSDK--------------YSCMIGYALATN 159
           GN+L+    K   V     G +P + R +   +K               + +IG  +A  
Sbjct: 120 GNLLLRFGGKDVSV--NVTGIQPERERLVTHLEKDLLSGSLDALYTTSNAIIIGEGIAAK 177

Query: 160 SFDREIDIGDKITINDK--KYKVIGILEE--TGNPRTENSVILSK-DVGEELFEINNEYN 214
           +  R+ D+   ++      K KV+GI     T     E   +L K  V +    + N  N
Sbjct: 178 AGIRKDDLISAVSPVGVVLKMKVVGIFRSNITLLDNFETYTLLKKAQVLQNRANVVNRLN 237

Query: 215 MMIVSVRSGEDVNLVSEEIKDELEDSRGDENFSVLTAEQLAESINSIFEVLTIFLVGVAG 274
           + +  V     +    E       +S  +++ +VL           IF +    +     
Sbjct: 238 LRLDDVEQAAPLAATIERQFGYRSESWQEQSRNVL----------GIFVIQNAIMYSTVS 287

Query: 275 ISLLVGAVGISNTMHMSILERRKDIGILKALGAENTTILSIFVVEAGFLGLFGGIVGTML 334
             L+V   GI N +   + E+ +DIGILK++G  +  I  IFV+E   +GL G ++G ++
Sbjct: 288 AILIVACFGIFNVISTVVFEKTRDIGILKSMGFRDKDIRRIFVMEGLIVGLIGTVIGWLM 347

Query: 335 GILIAKAIEYIAAI----------SGYGLIRAWISWELIVGVLVFSFVVGILSGYFPARS 384
           G  +   IE++A++           G+ L R    + +   + + S     L+ + PAR 
Sbjct: 348 GWGL---IEFMASLDFQMEGFVKAQGFVLYRTPKHYAISAAMAIAS---ATLAAWVPARR 401

Query: 385 GAKLNPVDTLRG 396
            ++LNPVD +RG
Sbjct: 402 ASRLNPVDIVRG 413