Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 414 a.a., lipoprotein-releasing system transmembrane subunit LolC from Magnetospirillum magneticum AMB-1

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 83/422 (19%), Positives = 176/422 (41%), Gaps = 52/422 (12%)

Query: 10  AGRNITQKKTQSFLTII------GVVIGILAIVSLISLGFGVQNYITSEITTIGANVISV 63
           A R +  ++ + F+++I      G+ +G+  ++ ++++  G ++ +   I  I  ++   
Sbjct: 11  AFRYLRARRKEGFISVIAGFSLAGIGLGVATLIVVMAVMNGFRHELLGRILGINGHI--- 67

Query: 64  LPSQNFGGPAVSKNFNDNDVSAVRNVRGVEEVVAAWFGSYELEYRDQSHYGNVLVIEPSK 123
                  G     +  D    ++R + GV  V+    G     +   S  G   ++   +
Sbjct: 68  ----GVYGSGAPLSGYDPLADSIRKLPGVTRVIPTAEGQV---FATSSGGGTGAIVRGVR 120

Query: 124 FTHVYSKTWGYEPYKGRWIEDSDKYSCMIGYALATNSFDREIDIGDKITINDKK------ 177
              + ++    + Y+G   + +   + +IG  LA     R   IGD I++   K      
Sbjct: 121 GQDLLTRPVFQKKYRGNPADFAGDDAVVIGKRLADKLGVR---IGDSISLISPKGNVTAF 177

Query: 178 --------YKVIGILEETGNPRTENSVILSKDVGEELFEINNEYNMMIVSVRSGEDVNLV 229
                   Y+V+G  +          + +  +  +  F +  +   + V + + + V   
Sbjct: 178 GTVPRMRGYRVVGTFDVGMFEYDSGFIFMPLEAAQTYFRLPEQVTQIEVFLENPDMV--- 234

Query: 230 SEEIKDELEDSRGDENFSVLTAEQLAESINSIFEVLTIFLVGVAGISLLVGAVGISNTMH 289
             E +  + D  G    ++   +Q   +  +  +V    +  +  + +LV A  I +++ 
Sbjct: 235 -PETRKAIWDLTGT-TATIYDWQQANANFFNAIQVERNVMFLILTLIILVAAFNIISSLI 292

Query: 290 MSILERRKDIGILKALGAENTTILSIFVVEAGFLGLFGGIVGTMLGILIAKAIE----YI 345
           M + ++ +DI IL+ +GA    IL IF +    +G+ G + GT+LG+  A  IE    +I
Sbjct: 293 MLVKDKGRDIAILRTMGATRGMILRIFFLAGASVGVVGTVAGTVLGVAFATNIENIRQFI 352

Query: 346 AAISGYGLIRAWISW----------ELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLR 395
            +I G  L  A I +            +V V++ +  +   +  +PA   AKL+PV+ LR
Sbjct: 353 QSIIGRELFAAEIYFLTQLPARVETREVVTVVLMALGLSFAATIYPAWRAAKLDPVEALR 412

Query: 396 GE 397
            E
Sbjct: 413 YE 414