Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 648 a.a., Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  128 bits (321), Expect = 5e-34
 Identities = 98/404 (24%), Positives = 191/404 (47%), Gaps = 22/404 (5%)

Query: 5   DVVSFAGRNITQKKTQSFLTIIGVVIGILAIVSLISLGFGVQNYITSEITTIGANVISVL 64
           + +S A   +   K ++ LT++G++IGI ++VS++ +G   +  + ++I  +G N I + 
Sbjct: 256 EALSMAWLAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRAMGTNTIDIH 315

Query: 65  PSQNFG--GPAVSKNFNDNDVSAVRNVRGVEEVVAAWFGSYELEYRDQSHYGNV-LVIEP 121
           P ++FG   P   +    +D+ A++    V     +   S  L Y      GN+ + +  
Sbjct: 316 PGKDFGDDNPQYRQALKYDDLVAIQKQPWVNSATPSVSKSLRLRY------GNIDIAVNA 369

Query: 122 SKFTHVYSKTWGYEPYKGRW---IEDSDKYSCMIGYALATNSF--DREIDIGDKITINDK 176
           +  +  Y   +G    +G     ++  D+   ++  A        ++   +G+ +   + 
Sbjct: 370 NGVSGDYFNVYGMSFREGNTFNAVQQQDRAQVVVLDANTRRQLFPNKANVVGEVVLAGNM 429

Query: 177 KYKVIGILEETGNPRTENSVI---LSKDVGEELFEINNEYNMMIVSVRSGEDVNLVSEEI 233
              VIG+ EE  +    ++++   L      +     +  N + V V+ G D +   +++
Sbjct: 430 PVIVIGVAEEKPSMYGNSNLLQVWLPYSTMSDRIMGQSWLNSITVRVKDGVDSDQAEQQL 489

Query: 234 KDELEDSRGDENFSVLTAEQLAESINSIFEVLTIFLVGVAGISLLVGAVGISNTMHMSIL 293
              L    G ++F     + + ++       L +FL  VA ISL+VG +G+ N M +S+ 
Sbjct: 490 TRLLTLRHGKKDFFTWNMDSVLKTAEKTTYTLQLFLTLVAVISLVVGGIGVMNIMLVSVT 549

Query: 294 ERRKDIGILKALGAENTTILSIFVVEAGFLGLFGGIVGTMLGILIAKAIEYIAAISGYGL 353
           ER ++IGI  A+GA  + +L  F++EA  + L GG +G  L + IA  ++    + G+ +
Sbjct: 550 ERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGISLSMFIAFMLQLF--LPGWEI 607

Query: 354 IRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397
                S   +    + S   GIL G+ PAR+ A+L+PVD L  E
Sbjct: 608 ---GFSLTALASAFLCSTFTGILFGWLPARNAARLDPVDALARE 648