Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 646 a.a., ABC-type antimicrobial peptide transport system, ATPase component from Enterobacter asburiae PDN3

 Score =  130 bits (326), Expect = 1e-34
 Identities = 106/404 (26%), Positives = 190/404 (47%), Gaps = 22/404 (5%)

Query: 5   DVVSFAGRNITQKKTQSFLTIIGVVIGILAIVSLISLGFGVQNYITSEITTIGANVISVL 64
           + ++ A   +   K ++ LT++G++IGI ++VS++ +G   +  + ++I  IG N I V 
Sbjct: 254 EALTMAWLAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQLVLADIRAIGTNTIDVY 313

Query: 65  PSQNFGG--PAVSKNFNDNDVSAVRNVRGVEEVVAAWFGSYELEYRDQSHYGNV-LVIEP 121
           P ++FG   P   +    +D++A++    V     A   +  L        GNV +    
Sbjct: 314 PGKDFGDDEPQYQQALKYDDLAAIQKQPWVNSATPAVSQNLRL------RVGNVDVAASA 367

Query: 122 SKFTHVYSKTWGYEPYKGRWIEDSDKYSCMIGYALATNS----FDREID-IGDKITINDK 176
           +  +  Y   +G    +G                L  NS    F  + + +G+ I + + 
Sbjct: 368 NGVSGDYFNVYGMTFSEGATFNAEQLAGRAQVVVLDANSRRQLFPNKANVVGEVILVGNM 427

Query: 177 KYKVIGILEETGNPRTENSVI---LSKDVGEELFEINNEYNMMIVSVRSGEDVNLVSEEI 233
              VIG+ EE  +    + ++   L            +  N + V V+ G D  L  +++
Sbjct: 428 PATVIGVAEEKQSMFGSSKILRVWLPYTTISGRIMGQSWLNSITVRVKEGYDSALAEQQL 487

Query: 234 KDELEDSRGDENFSVLTAEQLAESINSIFEVLTIFLVGVAGISLLVGAVGISNTMHMSIL 293
           +  L    G ++F     + L ++       L +FL  VA ISL+VG +G+ N M +S+ 
Sbjct: 488 ERLLTLRHGKKDFFTWNMDGLLKTAEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVT 547

Query: 294 ERRKDIGILKALGAENTTILSIFVVEAGFLGLFGGIVGTMLGILIAKAIEYIAAISGYGL 353
           ER ++IGI  A+GA  + +L  F++EA  + L GG +G  L ++IA A++    + G+ +
Sbjct: 548 ERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGAMGIALSMMIAFALQLF--LPGWEI 605

Query: 354 IRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397
                S   I+   + S   GIL G+ PAR+ A+L+PVD L  E
Sbjct: 606 ---GFSPVAIITAFLCSTFTGILFGWLPARNAARLDPVDALARE 646