Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 648 a.a., macrolide ABC transporter ATP-binding protein/permease MacB from Escherichia coli ECRC62

 Score =  136 bits (342), Expect = 2e-36
 Identities = 109/408 (26%), Positives = 196/408 (48%), Gaps = 30/408 (7%)

Query: 5   DVVSFAGRNITQKKTQSFLTIIGVVIGILAIVSLISLGFGVQNYITSEITTIGANVISVL 64
           + ++ A R +   K ++ LT++G++IGI ++VS++ +G   +  + ++I +IG N I V 
Sbjct: 256 EALTMAWRALAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVY 315

Query: 65  PSQNFGG--PAVSKNFNDNDVSAVRNVRGVEEVVAAWFGSYELEYRDQSHYGNVLVIEPS 122
           P ++FG   P   +    +D+ A++    V     A   +  L Y +     +   +   
Sbjct: 316 PGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASANGVSGD 375

Query: 123 KFTHVYSKTWGYEPYKGRWIEDSDKYSCMIGYALATNS----FDREIDI-GDKITINDKK 177
            F +VY  T+     +G                L +N+    F  + D+ G+ I + +  
Sbjct: 376 YF-NVYGMTFS----EGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430

Query: 178 YKVIGILEETGNPRTENSVI-----LSKDVGEELFEINNEYNMMIVSVRSGEDVNLVSEE 232
            +VIG+ EE  +    + V+      S   G  + +  +  N + V V+ G D     ++
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQ--SWLNSITVRVKEGFDSAEAEQQ 488

Query: 233 IKDELEDSRGDENFSVLTAEQLAESINSIFEVLTIFLVGVAGISLLVGAVGISNTMHMSI 292
           +   L    G ++F     + + +++      L +FL  VA ISL+VG +G+ N M +S+
Sbjct: 489 LTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSV 548

Query: 293 LERRKDIGILKALGAENTTILSIFVVEAGFLGLFGGIVGTMLGILIAKAIEYIAAISGYG 352
            ER ++IGI  A+GA  + +L  F++EA  + L GG +G  L +LIA  ++         
Sbjct: 549 TERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQL-------- 600

Query: 353 LIRAW-ISWELIVGVLVF--SFVVGILSGYFPARSGAKLNPVDTLRGE 397
            +  W I +  +  +L F  S V GIL G+ PAR+ A+L+PVD L  E
Sbjct: 601 FLPGWEIGFSPLALLLAFLCSTVTGILFGWLPARNAARLDPVDALARE 648