Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 453 a.a., ABC-type antimicrobial peptide transport system, permease component from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  125 bits (314), Expect = 2e-33
 Identities = 114/445 (25%), Positives = 196/445 (44%), Gaps = 69/445 (15%)

Query: 14  ITQKKTQSFLTIIGVVIGILAIVSLISLGFGVQNYITSEITTIGANVISVLPSQNF---- 69
           +   + +S LT +G++ G+ A+++++++G G Q  I  +I  +G N I + P        
Sbjct: 17  VMANRLRSLLTALGIIFGVAAVIAMMAIGNGAQQEILEQIKLVGVNNIIIEPVVEQVEEE 76

Query: 70  ------GGPAVSKNFNDNDVSAVRNVRGVEEVVAAWFGSYELEYRDQSHYGNVLVIEPSK 123
                 GGP   KN     +  + +V  ++EV+         E    +H     V   +K
Sbjct: 77  VQDGPGGGPGAEKNKFSPGLRML-DVEAIQEVIPG-IQRISPEVIMDTHIVKSGVRRSAK 134

Query: 124 FTHV---YSKTWGYEPYKGRWIEDSDKYS----CMIGYALATNSFDREIDIGDKITINDK 176
              V   Y K   ++  +G    +++  +    C+IG  + T  F +E  IG +I   ++
Sbjct: 135 LVGVTPEYFKVTNFKLREGGMFTENNLLNGDPVCIIGRGVQTKFFSKENAIGKRIKCGNQ 194

Query: 177 KYKVIGILEE-------------------------TGNPRTENS---------------V 196
             +VIGILEE                         T   R +N                V
Sbjct: 195 WMRVIGILEERIVSDKSLAKLGIRDFNMDVYIPMQTMLVRYKNRDMVTSGSLVSGRQGVV 254

Query: 197 ILSKDVGEELFEINNEYNM---MIVSVRSGEDVNLVSEEIKDELEDSRGDE-NFSVLTAE 252
           I++ +V +        Y+    ++V V     +N  +E +   LE    +  +F +   E
Sbjct: 255 IINGEVQQNTSNKQTNYHQIDKLVVQVEESSMLNPTAEVLSRLLERKHYNVIDFEITIPE 314

Query: 253 QLAESINSIFEVLTIFLVGVAGISLLVGAVGISNTMHMSILERRKDIGILKALGAENTTI 312
            L +       +  I L  +AGISLLVG +GI N M  S++ER K+IG+  ALGA+ T I
Sbjct: 315 LLLKQQQRTQNIFNIVLGAIAGISLLVGGIGIMNIMLASVMERIKEIGLRLALGAQKTDI 374

Query: 313 LSIFVVEAGFLGLFGGIVGTMLGILIAKAIEYIAAISGYGLIRAWISWELIVGVLVFSFV 372
           +  F+ EA  + + GGI+G +LGI++A      + +S +G     I+   I+     +  
Sbjct: 375 VHQFLFEAMMISVTGGIIGVILGIILA------SLVSQFGDFPTIITIPSILVSFSVAAT 428

Query: 373 VGILSGYFPARSGAKLNPVDTLRGE 397
           VG++ G  PA+  A  +P+ +LR E
Sbjct: 429 VGLIFGIAPAKRAASQDPITSLRHE 453