Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 414 a.a., ABC-type antimicrobial peptide transport system, permease component from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  118 bits (296), Expect = 3e-31
 Identities = 107/429 (24%), Positives = 199/429 (46%), Gaps = 47/429 (10%)

Query: 1   MRITDVVSFAGRNITQKKTQSFLTIIGVVIGILAIVSLISLGFGVQNYITSEITTIGANV 60
           M + + +  A R+I   + ++ LT + + IGI A+V +++   G++  I    + +GAN 
Sbjct: 1   MELLENIKEALRSIKSNRLRTILTGLIIAIGITALVGMLTAIDGMKAQIEESFSGLGANN 60

Query: 61  ISVLPSQNFGGPAVSKN-----------FNDN-DVSAVRNVRGVEEVVAAWFGSYELEYR 108
             V  S+N  G  V+++           + D  D     + RG+  V     GS E++  
Sbjct: 61  FDVR-SKNTSGQRVTRSGVTEKQFKPVSYKDALDFRKGYSSRGMATVSTRVSGSTEVKRG 119

Query: 109 DQSHYGNVLVIEPSKFTHVYSKTWGYEPYKGRWIEDSDKYS----------CMIGYALAT 158
            +    NV +I   +          Y   KG+ IE+   +S          C+IG  +  
Sbjct: 120 SEITNPNVRIIGVDE---------NYVLIKGQNIEEGRNFSNVEIEYGNNVCLIGSEIVE 170

Query: 159 NSF-DREIDIGDKITINDKKYKVIGILEETGNPRTENSV----ILSKDVGEELFEINNEY 213
             F   E  +G  ++    +Y ++G+LEE G+   ++ V    ++  +    L +    +
Sbjct: 171 LLFKSHENPVGAYVSFFGNRYSIVGVLEEQGSVGNDSGVDRTILIPVENASRLDQTGGFW 230

Query: 214 NMMIVSV----RSGEDVNLVSEEIKDELEDSRGD-ENFSVLTAEQLAESINSIFEVLTIF 268
             + VS     +   ++   +  ++   ED  G+ ++F V+ +  + ES+  +   L I 
Sbjct: 231 YTITVSTSDPTKMEYEMGQATGLMRKVREDRVGELDSFEVVKSNNVGESLEEVAGYLRIG 290

Query: 269 LVGVAGISLLVGAVGISNTMHMSILERRKDIGILKALGAENTTILSIFVVEAGFLGLFGG 328
             G+  I+LL  +VG+ N M +S+ ER ++IGI KALGA    I   F++EA  + + GG
Sbjct: 291 GFGIGFITLLGASVGLMNIMLVSVTERTREIGIRKALGATPKRIRQQFLIEAIVICIMGG 350

Query: 329 IVGTMLGILIAKAIEYIAAISGYGLIRAWISWELIVGVLVFSFVVGILSGYFPARSGAKL 388
           + G ++G+ I   +       G+ +   W+    ++ VL     VG++SG  PA   +KL
Sbjct: 351 VFGVLVGMGIGNIVASFVGPGGFLVPWLWMLLAFMICVL-----VGLVSGVIPAIKASKL 405

Query: 389 NPVDTLRGE 397
           +P++ LR E
Sbjct: 406 DPIEALRYE 414