Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 406 a.a., ABC transporter permease from Bacteroides stercoris CC31F

 Score =  141 bits (355), Expect = 4e-38
 Identities = 106/417 (25%), Positives = 212/417 (50%), Gaps = 31/417 (7%)

Query: 1   MRITDVVSFAGRNITQKKTQSFLTIIGVVIGILAIVSLISLGFGVQNYITSEITTIGANV 60
           M  T++   A R +   K ++FLT++G++IG+ ++++++++G G +  I ++I+ +G+N+
Sbjct: 1   MNGTNLFKIAFRALANNKLRAFLTMLGIIIGVASVITMLAIGQGSKKSIQAQISEMGSNM 60

Query: 61  ISVLPSQNFGG-----PAVSKNFNDNDVSAVRNVRGVEEVVAAWFGSYELEYRDQSHYGN 115
           I + P  +  G     P+  +     D  A+RN       V+    S        ++Y +
Sbjct: 61  IMIHPGADMRGGVRQDPSAMQTLKLTDYEALRNETNFLAAVSPNVSSSGQLIAGNNNYPS 120

Query: 116 VLVIEPSKFTHVYSKTWGYEPYKGRWIEDSDKYS----CMIGYALATNSFDREID-IGDK 170
            +    + +  +   T       G    ++D  +    C+IG  +  N F    D +G  
Sbjct: 121 SVSGVGTDYLEIRQLT----VENGTMFTETDIQTSAKVCVIGKTIQDNLFPNGEDPVGRI 176

Query: 171 ITINDKKYKVIGILEETGNPRT---ENSVILSKDVGEELFEINNEYNMMIVSVRSGEDV- 226
           I  N   ++V G+L+  G       ++ V+L+         +   Y   I +    ED+ 
Sbjct: 177 IRFNQVPFRVTGVLKAKGYNSMGMDQDDVVLAPYTTVMKRLLAQTYLQGIFASALTEDMT 236

Query: 227 NLVSEEI------KDELEDSRGDENFSVLTAEQLAESINSIFEVLTIFLVGVAGISLLVG 280
           +  +EEI        +L+DS  D++F++ + ++L+  +N+  +++T  L  +AGISL+VG
Sbjct: 237 DNATEEITGILRRNHKLKDS-DDDDFTIRSQQELSSMLNTTTDLMTTLLACIAGISLVVG 295

Query: 281 AVGISNTMHMSILERRKDIGILKALGAENTTILSIFVVEAGFLGLFGGIVGTMLGILIAK 340
            +GI N M++S+ ER ++IG+  ++GA    ILS F++EA  + + GG++G ++G   + 
Sbjct: 296 GIGIMNIMYVSVTERTREIGLRMSVGARGVDILSQFLIEAILISITGGLIGVIIGCGASW 355

Query: 341 AIEYIAAISGYGLIRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397
            ++  A    Y  I+A   W + +   V + V G+  G++PA+  A L+P++ +R E
Sbjct: 356 IVKSAAHWPIY--IQA---WSVFLSFAVCT-VTGVFFGWYPAKKAADLDPIEAIRYE 406