Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 410 a.a., Macrolide export ATP-binding/permease protein MacB from Azospirillum sp. SherDot2

 Score =  140 bits (354), Expect = 5e-38
 Identities = 114/422 (27%), Positives = 203/422 (48%), Gaps = 37/422 (8%)

Query: 1   MRITDVVSFAGRNITQKKTQSFLTIIGVVIGILAIVSLISLGFGVQNYITSEITTIGANV 60
           M   D +  A  ++     +S LT++G+VIG+ A+++++++G G ++ +  +I ++G N+
Sbjct: 1   MTAWDALRAALDSLRANPLRSALTMLGIVIGVAAVIAMVAVGAGARDQVLRQIASLGTNL 60

Query: 61  ISVLPSQ------NFGGPAVSKNFNDNDVSAVRNVRGVEEVVAAWFGSYELEY-RDQSHY 113
           I V            G    S    D+ ++ +  + GV  VV A    + L+      ++
Sbjct: 61  IMVGQGSIARGGVKLGAGTASSLTEDDALAVLSEIPGV--VVTAPSVRWGLQIVAGNQNW 118

Query: 114 GNVLVIEPSKFTHVYSKTWGYEPYKGRWIEDSDKYSC----MIGYALATNSFDREIDIGD 169
           G VL       T  Y     +    GR + D D        ++G  +  N F     IG+
Sbjct: 119 GTVLF----GITPDYMDARDWNVATGRGLSDEDVAQANKVVVLGQTVVRNLFGGGDPIGE 174

Query: 170 KITINDKKYKVIGILEETGNP---RTENSVIL-----SKDVGEELFEINNEY-NMMIVSV 220
            + +      V+G+L E G     + ++ VI      +K     + + N  + + M+V +
Sbjct: 175 PVRVFSTPLTVVGVLAEKGQNTQGQDQDDVIFVPLSTAKRNIPGMAKSNPRFIHTMVVKM 234

Query: 221 RSGEDVNLVSEEIKDELEDSRG-----DENFSVLTAEQLAESINSIFEVLTIFLVGVAGI 275
           R G D+     +I+D L          D++F +    +++ + ++    L+  L  VA +
Sbjct: 235 RDGTDMAEAQAQIRDLLRQRHRLVAGQDDDFWMRDLSEVSATRDASSRALSFLLAAVAAV 294

Query: 276 SLLVGAVGISNTMHMSILERRKDIGILKALGAENTTILSIFVVEAGFLGLFGGIVGTMLG 335
           SLLVG +GI N M +S+ ER ++IG+  A+GA    IL  F++E+  L L G  VG  LG
Sbjct: 295 SLLVGGIGIMNIMLVSVTERTREIGLRLAIGARRRDILVQFLIESTTLSLIGAAVGVALG 354

Query: 336 ILIAKAIEYIAAISGYGLIRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLR 395
           I  A     +AA++G+  +   I  + +V  +V S +VG+  G +PAR  A+LNP++ LR
Sbjct: 355 IGTAMG---VAALAGWPTL---IQIDSVVLAVVVSGIVGVFFGLYPARRAARLNPIEALR 408

Query: 396 GE 397
            E
Sbjct: 409 HE 410