Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 435 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score = 63.9 bits (154), Expect = 8e-15
 Identities = 56/244 (22%), Positives = 104/244 (42%), Gaps = 35/244 (14%)

Query: 176 KKYKVIGILEETGNPRTENSVILSKDVGEELFEINNEYNMMIVSVRSGEDVNLVSEEIKD 235
           K YK+ G+ E   +    + + +     +  F  N     + + V   +DV+ +   ++ 
Sbjct: 205 KSYKISGVFEIGMSEYDASMIYMPLSEAQLYFNANGIVQSIELYVSRPDDVDGIRPLVEQ 264

Query: 236 ELEDS--------RGDENFSVLTAEQLAESINSIFEVLTIFLVGVAGISLLVGAVGISNT 287
             E          R    FS L  E+     N +F +LT+ +        LV A+ I + 
Sbjct: 265 AAERQIYITDWRQRNQTFFSALQVER-----NVMFMILTLIV--------LVAALNIISG 311

Query: 288 MHMSILERRKDIGILKALGAENTTILSIFVVEAGFLGLFGGIVGTMLGILIAKAIE---- 343
           + M + ++  DI IL+ +GA +  ++ IF +    +G  G   G  LG+L+   +E    
Sbjct: 312 LIMLVKDKGSDIAILRTMGASSGAVMRIFFMTGAAIGTVGTFAGVALGVLVCLNVESIRQ 371

Query: 344 YIAAISGYGL----------IRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDT 393
           + + +SG  L          + A +     + V++ +  +  L+  FPA   +KL+PV  
Sbjct: 372 FFSWVSGTVLFDPQLYFLSQLPAEMDLSETITVVIMALTLSFLATIFPAWRASKLDPVQA 431

Query: 394 LRGE 397
           LR E
Sbjct: 432 LRYE 435