Pairwise Alignments

Query, 389 a.a., betaine/proline/choline family ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 392 a.a., ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  262 bits (669), Expect = 1e-74
 Identities = 142/291 (48%), Positives = 203/291 (69%), Gaps = 8/291 (2%)

Query: 5   IIQVTELYKIFGKKPEKAYPLIKEGFSRQEIKEKTKQVVGLRNINFDVKRGEIFVIMGLS 64
           II+  ++  IF K P +A  L+ +G SR EI +KT Q+VG+   + D+++GEI V+MGLS
Sbjct: 3   IIRFDKVDVIFSKDPREALKLLDQGMSRNEILKKTGQIVGVEKASLDIEKGEICVLMGLS 62

Query: 65  GSGKSTLIRCINRLIKPTFGKIVLETGA---DISQMSEKELLEIRRKYFGMVFQKFGLLP 121
           GSGKS+L+RCIN L   + G++ +E      DI+  +  EL  +R K   MVFQKF L+P
Sbjct: 63  GSGKSSLLRCINGLNTVSRGQLFVEHEGRQIDIASCTPAELKMMRTKRIAMVFQKFALMP 122

Query: 122 NRSVLENVALGLEIQGMGLEERIEKSEKALSLVGLKGWEKSKISELSGGMQQRVGLARGL 181
             +V EN++ GLE+QG   ++R +  ++ L LVGL  W   K  ELSGGMQQRVGLAR L
Sbjct: 123 WLTVRENISFGLEMQGRPEKDRRKLVDEKLELVGLTQWRNKKPDELSGGMQQRVGLARAL 182

Query: 182 AVNPEILLMDEPFSALDPLIRLEMQELLLKIQKKMKKTIIFITHDLNEAIKLGDRIMILN 241
           A++ +ILLMDEPFSALDPLIR  +Q+ LL++Q+K+ KTI+F++HDL+EA+KLG RI I+ 
Sbjct: 183 AMDADILLMDEPFSALDPLIRQGLQDELLELQRKLSKTIVFVSHDLDEALKLGSRIAIM- 241

Query: 242 EEGSLVQLSHPEEILLNPQNDFVESFVKDVDKTTVIRAESLVKKPEFTLNN 292
           ++G ++Q S PEEI+LNP +D+V +FV   +   V+   SL++    TL+N
Sbjct: 242 KDGKIIQYSVPEEIVLNPADDYVRTFVAHTNPLNVLCGRSLMR----TLDN 288