Pairwise Alignments

Query, 389 a.a., betaine/proline/choline family ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 329 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  160 bits (406), Expect = 4e-44
 Identities = 91/240 (37%), Positives = 142/240 (59%), Gaps = 8/240 (3%)

Query: 47  NINFDVKRGEIFVIMGLSGSGKSTLIRCINRLIKPTFGKIVLETGADISQMSEKELLEIR 106
           +IN +V +GE   ++G SG GKSTL+RCI  L     GKI+L+   DI  +S +      
Sbjct: 21  DINCEVAKGEFVTLLGPSGCGKSTLLRCIAGLTSVDSGKILLDD-QDIVPLSPQ------ 73

Query: 107 RKYFGMVFQKFGLLPNRSVLENVALGLEIQGMGLEERIEKSEKALSLVGLKGWEKSKISE 166
           +++ GMVFQ + L PN +V +NVA GL +Q +  ++  ++ ++ L LV LK        +
Sbjct: 74  KRHIGMVFQSYALFPNMTVEQNVAFGLRMQKVNADDSHKRVQEVLQLVELKDLAGRYPHQ 133

Query: 167 LSGGMQQRVGLARGLAVNPEILLMDEPFSALDPLIRLEMQELLLKIQKKMKKTIIFITHD 226
           +SGG  QRV LAR L   P +LL+DEP SALD  IR  ++E + +IQ+++  T IF+THD
Sbjct: 134 MSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRKHLREQIRQIQRELGLTTIFVTHD 193

Query: 227 LNEAIKLGDRIMILNEEGSLVQLSHPEEILLNPQNDFVESFVKDVDKTTVIRAESLVKKP 286
             EA+ + DRI ++N +G +VQ    E +   P + F   F+ + +     +A  L+++P
Sbjct: 194 QEEALTMSDRIFLMN-QGKIVQSGDAETLYTAPVDVFAAGFIGNYNLLDADKATQLLQRP 252