Pairwise Alignments

Query, 389 a.a., betaine/proline/choline family ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 344 a.a., polyamine ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  159 bits (402), Expect = 1e-43
 Identities = 90/240 (37%), Positives = 140/240 (58%), Gaps = 11/240 (4%)

Query: 41  QVVGLRNINFDVKRGEIFVIMGLSGSGKSTLIRCINRLIKPTFGKIVLETGADISQMSEK 100
           +V  +  ++ D++ GE F ++G SGSGK+T +R I    +P+ G I +          E 
Sbjct: 16  EVKAVDRVSIDIQDGEFFSMLGPSGSGKTTCLRLIAGFEQPSAGSIRIHG-------EEA 68

Query: 101 ELLEIRRKYFGMVFQKFGLLPNRSVLENVALGLEIQGMGLEERIEKSEKALSLVGLKGWE 160
             L   ++    VFQ + L P+ +V +NVA GL+++G+G  ER+ ++E+AL +V L G+ 
Sbjct: 69  AGLPPYQRDVNTVFQDYALFPHMNVRDNVAYGLKVKGVGKTERMNRAEEALGMVALGGYG 128

Query: 161 KSKISELSGGMQQRVGLARGLAVNPEILLMDEPFSALDPLIRLEMQELLLKIQKKMKKTI 220
             K  +LSGG +QRV LAR L   P +LL+DEP  ALD  +R +MQ  L K+Q+++  T 
Sbjct: 129 DRKPVQLSGGQRQRVALARALVNRPRVLLLDEPLGALDLKLREQMQSELKKLQRQLGITF 188

Query: 221 IFITHDLNEAIKLGDRIMILNEEGSLVQLSHPEEILLNPQNDFVESFVKDVDKTTVIRAE 280
           IF+THD  EA+ + DR+ + N +G + Q+  P  + + P   FV  F   V  + VIR E
Sbjct: 189 IFVTHDQTEALSMSDRVAVFN-KGRIEQVDTPRNLYMKPATSFVAEF---VGTSNVIRGE 244