Pairwise Alignments

Query, 389 a.a., betaine/proline/choline family ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 392 a.a., Choline / carnitine / glycine betaine ABC transporter, ATPase component (from data) from Pseudomonas putida KT2440

 Score =  257 bits (657), Expect = 3e-73
 Identities = 139/283 (49%), Positives = 196/283 (69%), Gaps = 4/283 (1%)

Query: 5   IIQVTELYKIFGKKPEKAYPLIKEGFSRQEIKEKTKQVVGLRNINFDVKRGEIFVIMGLS 64
           II+  ++  IF  KP +A  L+ +G +R++I ++T  VVG+   N D+ +GEI V+MGLS
Sbjct: 3   IIRFEDVDVIFSNKPREALALLDQGQTREQILKQTGLVVGVEKANLDINKGEICVLMGLS 62

Query: 65  GSGKSTLIRCINRLIKPTFGKIVLETGA---DISQMSEKELLEIRRKYFGMVFQKFGLLP 121
           GSGKS+L+RCIN L   + GK+ +E      DI+  S  EL  +R K   MVFQKF L+P
Sbjct: 63  GSGKSSLLRCINGLNTVSRGKLFVEHEGKHIDIANCSAAELKMMRTKRIAMVFQKFALMP 122

Query: 122 NRSVLENVALGLEIQGMGLEERIEKSEKALSLVGLKGWEKSKISELSGGMQQRVGLARGL 181
             +V EN++ GLE+QG   +ER +  ++ L LVGL  W   K  ELSGGMQQRVGLAR L
Sbjct: 123 WLTVRENISFGLEMQGRPEKERRKLVDEKLELVGLTQWRNKKPDELSGGMQQRVGLARAL 182

Query: 182 AVNPEILLMDEPFSALDPLIRLEMQELLLKIQKKMKKTIIFITHDLNEAIKLGDRIMILN 241
           A++ +ILLMDEPFSALDPLIR  +Q+ LL +Q K+ KTI+F++HDL+EA+KLG RI I+ 
Sbjct: 183 AMDADILLMDEPFSALDPLIRQGLQDELLGLQAKLSKTIVFVSHDLDEALKLGTRIAIM- 241

Query: 242 EEGSLVQLSHPEEILLNPQNDFVESFVKDVDKTTVIRAESLVK 284
           ++G ++Q S PEEI+LNP +++V +FV   +   V+   SL++
Sbjct: 242 KDGRIIQYSKPEEIVLNPADEYVRTFVAHTNPLNVLCGRSLMR 284