Pairwise Alignments

Query, 389 a.a., betaine/proline/choline family ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 400 a.a., glycine betaine transporter subunit (NCBI) from Escherichia coli BW25113

 Score =  317 bits (812), Expect = 4e-91
 Identities = 169/384 (44%), Positives = 268/384 (69%), Gaps = 16/384 (4%)

Query: 6   IQVTELYKIFGKKPEKAYPLIKEGFSRQEIKEKTKQVVGLRNINFDVKRGEIFVIMGLSG 65
           +++  LYKIFG+ P++A+  I++G S+++I EKT   +G+++ +  ++ GEIFVIMGLSG
Sbjct: 5   LEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSG 64

Query: 66  SGKSTLIRCINRLIKPTFGKIVLETGADISQMSEKELLEIRRKYFGMVFQKFGLLPNRSV 125
           SGKST++R +NRLI+PT G+++++ G DI+++S+ EL E+RRK   MVFQ F L+P+ +V
Sbjct: 65  SGKSTMVRLLNRLIEPTRGQVLID-GVDIAKISDAELREVRRKKIAMVFQSFALMPHMTV 123

Query: 126 LENVALGLEIQGMGLEERIEKSEKALSLVGLKGWEKSKISELSGGMQQRVGLARGLAVNP 185
           L+N A G+E+ G+  EER EK+  AL  VGL+ +  S   ELSGGM+QRVGLAR LA+NP
Sbjct: 124 LDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYPDELSGGMRQRVGLARALAINP 183

Query: 186 EILLMDEPFSALDPLIRLEMQELLLKIQKKMKKTIIFITHDLNEAIKLGDRIMILNEEGS 245
           +ILLMDE FSALDPLIR EMQ+ L+K+Q K ++TI+FI+HDL+EA+++GDRI I+ + G 
Sbjct: 184 DILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIM-QNGE 242

Query: 246 LVQLSHPEEILLNPQNDFVESFVKDVDKTTVIRAESLVKKPEFTLNNTIEK------ENA 299
           +VQ+  P+EIL NP ND+V +F + VD + V  A+ + ++   T N  I K       +A
Sbjct: 243 VVQVGTPDEILNNPANDYVRTFFRGVDISQVFSAKDIARR---TPNGLIRKTPGFGPRSA 299

Query: 300 VKILGELNLDFAYVLDDSGKYIGVVNNEELQNS---EKIMDCIHKIKPLE-DVKT-INQG 354
           +K+L + + ++ YV++   K++G V+ + L+ +   ++ +D      PL  D +T +++ 
Sbjct: 300 LKLLQDEDREYGYVIERGNKFVGAVSIDSLKTALTQQQGLDAALIDAPLAVDAQTPLSEL 359

Query: 355 LPQFISSDYPVPIVDDENNFLGYV 378
           L     +   VP+VD++  ++G +
Sbjct: 360 LSHVGQAPCAVPVVDEDQQYVGII 383