Pairwise Alignments

Query, 389 a.a., betaine/proline/choline family ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 400 a.a., glycine betaine/L-proline ABC transporter ATP-binding protein ProV from Dickeya dianthicola ME23

 Score =  309 bits (792), Expect = 8e-89
 Identities = 163/381 (42%), Positives = 262/381 (68%), Gaps = 10/381 (2%)

Query: 6   IQVTELYKIFGKKPEKAYPLIKEGFSRQEIKEKTKQVVGLRNINFDVKRGEIFVIMGLSG 65
           I+VT L+KIFG+ PE+A+ L+++G S+ +I EKT   VG+++ +  ++ GE+FVIMGLSG
Sbjct: 5   IEVTHLHKIFGEHPERAFRLLEQGLSKDQIFEKTGLTVGVKDASLAIEEGEVFVIMGLSG 64

Query: 66  SGKSTLIRCINRLIKPTFGKIVLETGADISQMSEKELLEIRRKYFGMVFQKFGLLPNRSV 125
           SGKSTL+R +NRLI+PT G+++++ G DIS++ +  L  +RRK   MVFQ F L+P+ ++
Sbjct: 65  SGKSTLVRLLNRLIEPTRGQVLID-GEDISRLPDGALRAVRRKKISMVFQSFALMPHLNI 123

Query: 126 LENVALGLEIQGMGLEERIEKSEKALSLVGLKGWEKSKISELSGGMQQRVGLARGLAVNP 185
           L+N A G+++ G+   ER +K+  AL  VGL+ +  +   ELSGGM+QRVGLAR LA +P
Sbjct: 124 LDNTAFGMDLAGVPHVEREQKALSALQQVGLEAYANAYPDELSGGMRQRVGLARALANDP 183

Query: 186 EILLMDEPFSALDPLIRLEMQELLLKIQKKMKKTIIFITHDLNEAIKLGDRIMILNEEGS 245
           +ILLMDE FSALDPLIR EMQ+ L+K+Q + ++TI+FI+HDL+EA+++GDRI I++  G 
Sbjct: 184 DILLMDEAFSALDPLIRTEMQDELIKLQARQQRTIVFISHDLDEAMRIGDRIAIMH-SGE 242

Query: 246 LVQLSHPEEILLNPQNDFVESFVKDVDKTTVIRAESLVKK-PEFTLNNT--IEKENAVKI 302
           ++Q+  P+EIL NP ND+V +F + VD + V  A+ + ++ P   +  T  +   +A+KI
Sbjct: 243 VIQVGTPDEILNNPANDYVRTFFRGVDISHVFSAKDIARRSPVAVIRKTPGVGPRSALKI 302

Query: 303 LGELNLDFAYVLDDSGKYIGVVNNEELQNSEKIMDCIHKI-----KPLEDVKTINQGLPQ 357
           L   + ++ YVL+   K+IGVV+ + L+ + +    + +       P+    ++N+ + Q
Sbjct: 303 LQAEDREYGYVLERGRKFIGVVSIDSLKQALRERQPLEQALLPAPAPVPANMSLNELISQ 362

Query: 358 FISSDYPVPIVDDENNFLGYV 378
              +   VP+VD+ + +LG +
Sbjct: 363 VAQAPCAVPVVDENHEYLGII 383