Pairwise Alignments

Query, 389 a.a., betaine/proline/choline family ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 353 a.a., glycine betaine ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  292 bits (748), Expect = 9e-84
 Identities = 159/332 (47%), Positives = 230/332 (69%), Gaps = 9/332 (2%)

Query: 6   IQVTELYKIFGKKPEKAYPLIKEGFSRQEIKEKTKQVVGLRNINFDVKRGEIFVIMGLSG 65
           I++  LYKIFG K       +K G S+ E+      V+GLR+IN  +  G+I VIMGLSG
Sbjct: 6   IEIRSLYKIFGSKAANHVEAVKAGMSKAELNTTHGHVLGLRDINITMPGGQITVIMGLSG 65

Query: 66  SGKSTLIRCINRLIKPTFGKIVLETGADISQMSEKELLEIRRKYFGMVFQKFGLLPNRSV 125
           SGKSTLIR +NRLI PT G+I L  G D+ +++E +LLE RR    MVFQKFGLLP+R+V
Sbjct: 66  SGKSTLIRHVNRLIDPTAGEI-LYGGTDVCRLNEADLLEFRRHKTAMVFQKFGLLPHRNV 124

Query: 126 LENVALGLEIQGMGLEERIEKSEKALSLVGLKGWEKSKISELSGGMQQRVGLARGLAVNP 185
           L+NV  GLE+QG+   ER E++E  +  VGL+G+     ++LSGGMQQRVGLAR L  N 
Sbjct: 125 LQNVVYGLEVQGIDKREREERAEVWIRRVGLEGFSNHYPNQLSGGMQQRVGLARALTNNA 184

Query: 186 EILLMDEPFSALDPLIRLEMQELLLKIQKKMKKTIIFITHDLNEAIKLGDRIMILNEEGS 245
           EILLMDE +SALDPLIR++MQ +LL++QK++KKT++FITHDL+EA++LGD+I IL  +G 
Sbjct: 185 EILLMDEAYSALDPLIRVDMQTVLLELQKELKKTVVFITHDLDEALRLGDKIAIL-RDGE 243

Query: 246 LVQLSHPEEILLNPQNDFVESFVKDVDKTTVIRAESLVKKPEFT------LNNTIEKENA 299
           ++Q     EI+++P + ++E+FV++V++  VIR  ++V +PEF+      L+  +  E  
Sbjct: 244 IIQQGTAAEIVMSPADSYIEAFVEEVNRGRVIRLGAIV-QPEFSGQSRLQLDADMTVEEG 302

Query: 300 VKILGELNLDFAYVLDDSGKYIGVVNNEELQN 331
           ++ L   N+  A V  ++GK +G V  + + +
Sbjct: 303 LRALVRENVSSATVAGENGKVLGTVTTDAIMH 334