Pairwise Alignments

Query, 389 a.a., betaine/proline/choline family ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 348 a.a., ABC transporter, nucleotide binding/ATPase protein (proline/glycine betaine) from Agrobacterium fabrum C58

 Score =  233 bits (594), Expect = 6e-66
 Identities = 123/275 (44%), Positives = 179/275 (65%), Gaps = 4/275 (1%)

Query: 14  IFGKKPEKAYPLIKEGFSRQEIKEKTKQVVGLRNINFDVKRGEIFVIMGLSGSGKSTLIR 73
           +FG +P+ A  LI +G +R EI  +T  V+G+ N +  V  GEI V+MGLSGSGKSTL+R
Sbjct: 13  VFGDRPDAALALIDKGSTRDEINAQTGLVLGVANASLSVSEGEILVLMGLSGSGKSTLVR 72

Query: 74  CINRLIKPTFGKIVLETGA---DISQMSEKELLEIRRKYFGMVFQKFGLLPNRSVLENVA 130
            +N L     G + ++T +   D  +   K L ++R     MVFQ+FGLLP R+V +NV 
Sbjct: 73  AVNGLAPVVRGSVSVKTKSGYVDPYRCPAKALRDLRMHTVSMVFQQFGLLPWRNVADNVG 132

Query: 131 LGLEIQGMGLEERIEKSEKALSLVGLKGWEKSKISELSGGMQQRVGLARGLAVNPEILLM 190
            GLE+ G+   ER     + L LV L  W   K+ ELSGGMQQRVGLAR  A    ILLM
Sbjct: 133 FGLELSGVPEAERKRMVAEQLELVNLSAWADRKVGELSGGMQQRVGLARAFATGAPILLM 192

Query: 191 DEPFSALDPLIRLEMQELLLKIQKKMKKTIIFITHDLNEAIKLGDRIMILNEEGSLVQLS 250
           DEPFSALDPLIR  +Q+ LL+ Q ++KKTI+F++HDL+EA ++G+RI ++ E G ++Q  
Sbjct: 193 DEPFSALDPLIRSRLQDELLEFQSRLKKTILFVSHDLDEAFRIGNRIAMM-EGGHIIQCG 251

Query: 251 HPEEILLNPQNDFVESFVKDVDKTTVIRAESLVKK 285
            P++I+  P   +V  FV++++  +++ A  ++K+
Sbjct: 252 TPQQIVRQPATPYVADFVQNMNPISMLTAADVMKR 286