Pairwise Alignments

Query, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

Subject, 281 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  204 bits (519), Expect = 2e-57
 Identities = 102/265 (38%), Positives = 173/265 (65%), Gaps = 5/265 (1%)

Query: 9   IGKFLVNLIDFLIDNYSGFFDLISYVIQSGVDFFHFLLFSINPYLMILLIAVI---VWKT 65
           +G+++   +++L  + + +FD I+  +++ +    F L   NP  +I LIA++   + + 
Sbjct: 9   LGQYIAAFVEWLTQHGANYFDAIASTLETMIHGVTFALTWFNPLALIGLIALLAHFIQRK 68

Query: 66  VNLKSMLYSVFFLVIIVMMGLWDTSMITLSLIITSTLIALLLGIPLGIVKARSKLVSTLL 125
             L   + + F L++   +G W  +M TL+ ++ +TL+ +++G+PLGIV A   +  T++
Sbjct: 69  WGLTVFVIASFLLIL--NLGYWQETMETLAQVLFATLVCVVIGVPLGIVAAHKPMFYTMM 126

Query: 126 DPMLDVMQTLPSLAYLIPAVLFFGIGEVPGVIATVIFAMPPAIKLTALGIEQVSNELIEV 185
            P+LD+MQT+P+  YLIP +  FG+G VPG+I+TV+FA+   I+LT LGI  V  EL++ 
Sbjct: 127 RPVLDLMQTVPTFVYLIPTLTLFGLGVVPGLISTVVFAIAAPIRLTYLGIRDVPQELMDA 186

Query: 186 GRAFGGTSWQILTKIELPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSGGLGEVIISGIQR 245
           G+AFG +  Q+L++IELP A+PSI  G+ Q IMLS SMVVIA  +G+ GLG+ +++ +  
Sbjct: 187 GKAFGCSRRQLLSRIELPHAMPSIAAGITQCIMLSLSMVVIAALVGADGLGKPVVNALNT 246

Query: 246 YSLAPALEAGIAVTFLAVIFDRITR 270
             +A   EAG+A+  LA++ DRI +
Sbjct: 247 ADIALGFEAGLAIVLLAIMLDRICK 271