Pairwise Alignments

Query, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

Subject, 391 a.a., Glycine betaine/L-proline transport system permease protein ProW (TC 3.A.1.12.1) from Variovorax sp. SCN45

 Score =  225 bits (573), Expect = 1e-63
 Identities = 107/271 (39%), Positives = 173/271 (63%)

Query: 6   NLGIGKFLVNLIDFLIDNYSGFFDLISYVIQSGVDFFHFLLFSINPYLMILLIAVIVWKT 65
           +L I  ++   + ++++++  FF  +   I S ++    LL  +    MI LI +  W+ 
Sbjct: 79  SLPIESWINQGLGWVVEHFRPFFQTVRLPIDSTLNSVQSLLTGLPTLAMIALIGLFAWQF 138

Query: 66  VNLKSMLYSVFFLVIIVMMGLWDTSMITLSLIITSTLIALLLGIPLGIVKARSKLVSTLL 125
                 + +   L+++ M+G+W  +M+TLSL++TS +  +++G+PLG++ A S     ++
Sbjct: 139 AGRALAIGTTVALLLVAMLGIWPEAMVTLSLVLTSLVFCMVIGLPLGVLLASSDRAQRIM 198

Query: 126 DPMLDVMQTLPSLAYLIPAVLFFGIGEVPGVIATVIFAMPPAIKLTALGIEQVSNELIEV 185
            P+LD MQT P+  YL+P V+ FGIG VPGVI T+IFA+ P ++LT LG+ QV  +LIE 
Sbjct: 199 RPVLDAMQTTPAFVYLVPVVMLFGIGNVPGVIVTIIFALAPLVRLTNLGLRQVRPDLIEA 258

Query: 186 GRAFGGTSWQILTKIELPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSGGLGEVIISGIQR 245
            RA+G + WQ+L K++LP A+PSIM G+NQA+MLS SMVVIA  I  GGLG++++ GI R
Sbjct: 259 ARAYGASPWQMLVKVQLPLAMPSIMAGINQALMLSLSMVVIASMIAVGGLGQMVLRGIGR 318

Query: 246 YSLAPALEAGIAVTFLAVIFDRITRNLVGSK 276
             +  A   G+ +  LA+  DR+T+ +  S+
Sbjct: 319 LDMGLATVGGLGIVLLAISLDRLTQAMGKSR 349