Pairwise Alignments

Query, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

Subject, 282 a.a., glycine betaine ABC transporter (permease) from Pseudomonas putida KT2440

 Score =  212 bits (539), Expect = 8e-60
 Identities = 109/270 (40%), Positives = 173/270 (64%), Gaps = 5/270 (1%)

Query: 4   TFNLGIGKFLVNLIDFLIDNYSGFFDLISYVIQSGVDFFHFLLFSINPYLMILLIAVIVW 63
           T        +  L+D+L+ NY      +S  +   +     LL  +  +L++LL+ ++ W
Sbjct: 8   TLQFSFADSINRLVDWLVLNYGDHLRSLSDQLLQLLVGLENLLRLLPWWLLLLLVGLLAW 67

Query: 64  KTVNLKSMLYS---VFFLVIIVMMGLWDTSMITLSLIITSTLIALLLGIPLGIVKARSKL 120
                +S+L S   V  L +I M+GLWD  + TL+L++ ST + +L+G+PLGI+ A   L
Sbjct: 68  HAS--RSLLRSAVLVALLALIGMLGLWDKLLQTLALVLVSTGLCVLVGVPLGILLAARPL 125

Query: 121 VSTLLDPMLDVMQTLPSLAYLIPAVLFFGIGEVPGVIATVIFAMPPAIKLTALGIEQVSN 180
              LL P+LDVMQTLP+  YLIP ++ FG+G+VP V AT+I+A+PP ++LT LG+ Q+  
Sbjct: 126 ARRLLLPVLDVMQTLPAFVYLIPVLMLFGLGKVPAVFATLIYALPPLVRLTELGLSQIDP 185

Query: 181 ELIEVGRAFGGTSWQILTKIELPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSGGLGEVII 240
            L++     G + WQ L +I LP A+PSIM G+NQ++M++ SMVV+A  IG+ GLGE ++
Sbjct: 186 SLLQAAHGLGASRWQRLRRIALPLALPSIMAGLNQSVMMALSMVVVASMIGARGLGEDVL 245

Query: 241 SGIQRYSLAPALEAGIAVTFLAVIFDRITR 270
           +GIQ  ++   +EAG+A+  LA++ DRI++
Sbjct: 246 AGIQTLNVGQGMEAGLAIVALAMVIDRISQ 275