Pairwise Alignments

Query, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

Subject, 698 a.a., glycine betaine ABC transporter, ATPase/permease fusion protein from Pseudomonas putida KT2440

 Score =  193 bits (491), Expect = 8e-54
 Identities = 96/213 (45%), Positives = 141/213 (66%)

Query: 56  LLIAVIVWKTVNLKSMLYSVFFLVIIVMMGLWDTSMITLSLIITSTLIALLLGIPLGIVK 115
           L +  + W++      L +   L  I + G W+ ++ T++L+  S L++LL+GIP GI+ 
Sbjct: 472 LALVYLAWRSAGAILALTTALALGYIGLFGFWERTISTIALVGASVLLSLLIGIPTGILL 531

Query: 116 ARSKLVSTLLDPMLDVMQTLPSLAYLIPAVLFFGIGEVPGVIATVIFAMPPAIKLTALGI 175
           A+  L   L+ P+LDVMQTLP+  YLIPAV FF +G+ P VIATVIFA+ P I+LTALGI
Sbjct: 532 AKRALARRLVTPLLDVMQTLPTFVYLIPAVAFFSVGKTPAVIATVIFALAPMIRLTALGI 591

Query: 176 EQVSNELIEVGRAFGGTSWQILTKIELPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSGGL 235
           ++V    +E   A G T WQ LT++ELP A  S+++GVNQ I++S SMVV+A  IG+GGL
Sbjct: 592 QEVPKAAVEAAVAHGATPWQTLTRVELPLASGSLLLGVNQTIVMSLSMVVVAALIGAGGL 651

Query: 236 GEVIISGIQRYSLAPALEAGIAVTFLAVIFDRI 268
           G  +++ ++       + AGIA+ F A++ DRI
Sbjct: 652 GYDVMTALRNIKGGEGVLAGIAIVFCALVPDRI 684