Pairwise Alignments

Query, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

Subject, 236 a.a., Putative ABC transporter membrane protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  102 bits (253), Expect = 1e-26
 Identities = 64/221 (28%), Positives = 107/221 (48%), Gaps = 17/221 (7%)

Query: 65  TVNLKSMLYSVFFLVIIVMMGLWDTSMITLS---------------LIITSTLIALLLGI 109
           T+ LK +L     +++++ + +W   + TL                L+ TS   ALL+GI
Sbjct: 3   TLTLKRVLGFTIVILLLLALFIWGIGLETLKARQVDLLYLGQRHLMLVFTSMFFALLVGI 62

Query: 110 PLGIVKAR--SKLVSTLLDPMLDVMQTLPSLAYLIPAVLFFGIGEVPGVIATVIFAMPPA 167
           P GI+ +R  +K  +  +  + +V  TLP LA L  A++  GIG+ P ++A  + ++ P 
Sbjct: 63  PSGILLSRPAAKGFAEYVMQIFNVGNTLPPLAVLALAMVIIGIGDTPAIVALFLASLLPI 122

Query: 168 IKLTALGIEQVSNELIEVGRAFGGTSWQILTKIELPTAVPSIMMGVNQAIMLSFSMVVIA 227
           ++ T  G+  V   LIE     G T WQ L ++ELP A P ++ G+  A  ++     +A
Sbjct: 123 VRNTYAGLCSVPASLIEAANGIGMTKWQRLRQVELPNAWPVMLSGIRIATAINVGTAPLA 182

Query: 228 GFIGSGGLGEVIISGIQRYSLAPALEAGIAVTFLAVIFDRI 268
             IG+   GE+I  GI        +    A    A+I D +
Sbjct: 183 FLIGASSYGELIFPGIYLNDFPTLILGATATALFALILDTL 223