Pairwise Alignments

Query, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

Subject, 354 a.a., glycine betaine transporter subunit (NCBI) from Escherichia coli BW25113

 Score =  214 bits (545), Expect = 2e-60
 Identities = 104/254 (40%), Positives = 166/254 (65%)

Query: 17  IDFLIDNYSGFFDLISYVIQSGVDFFHFLLFSINPYLMILLIAVIVWKTVNLKSMLYSVF 76
           ID+++ ++   F  +   +   ++ F  LL  +   + I++ A+I W+   +   + ++ 
Sbjct: 72  IDWVVTHFRPVFQGVRVPVDYILNGFQQLLLGMPAPVAIIVFALIAWQISGVGMGVATLV 131

Query: 77  FLVIIVMMGLWDTSMITLSLIITSTLIALLLGIPLGIVKARSKLVSTLLDPMLDVMQTLP 136
            L+ I  +G W  +M+TL+L++T+ L  +++G+PLGI  ARS   + ++ P+LD MQT P
Sbjct: 132 SLIAIGAIGAWSQAMVTLALVLTALLFCIVIGLPLGIWLARSPRAAKIIRPLLDAMQTTP 191

Query: 137 SLAYLIPAVLFFGIGEVPGVIATVIFAMPPAIKLTALGIEQVSNELIEVGRAFGGTSWQI 196
           +  YL+P V+ FGIG VPGV+ T+IFA+PP I+LT LGI QV  +LIE  R+FG +  Q+
Sbjct: 192 AFVYLVPIVMLFGIGNVPGVVVTIIFALPPIIRLTILGINQVPADLIEASRSFGASPRQM 251

Query: 197 LTKIELPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSGGLGEVIISGIQRYSLAPALEAGI 256
           L K++LP A+P+IM GVNQ +ML+ SMVVIA  I  GGLG++++ GI R  +  A   G+
Sbjct: 252 LFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVGGLGQMVLRGIGRLDMGLATVGGV 311

Query: 257 AVTFLAVIFDRITR 270
            +  LA+I DR+T+
Sbjct: 312 GIVILAIILDRLTQ 325