Pairwise Alignments

Query, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

Subject, 385 a.a., predicted transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

 Score = 88.6 bits (218), Expect = 2e-22
 Identities = 57/191 (29%), Positives = 99/191 (51%), Gaps = 16/191 (8%)

Query: 94  LSLIITSTLIALLLGIPLGIVKARSKLVSTLLDPMLDVMQTLPS----------LAYLIP 143
           L+L+  + L AL++G+PLGI    S      +  +L+V+QT+PS          LA L+ 
Sbjct: 181 LTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVT 240

Query: 144 AVLFFGI------GEVPGVIATVIFAMPPAIKLTALGIEQVSNELIEVGRAFGGTSWQIL 197
           A  + G       G  P +IA V++A+ P ++   +G+ Q+  +++E  RA G +  Q  
Sbjct: 241 AFPWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRF 300

Query: 198 TKIELPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSGGLGEVIISGIQRYSLAPALEAGIA 257
             ++LP A+P  +  +   ++ +  M VIA  IG+GG G ++  G+   ++   L   I 
Sbjct: 301 LHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAGGFGALVFQGLLSSAIDLVLLGVIP 360

Query: 258 VTFLAVIFDRI 268
           V  LAV+ D +
Sbjct: 361 VIVLAVLTDAL 371