Pairwise Alignments

Query, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

Subject, 243 a.a., putative ABC transporter permease from Escherichia coli BL21

 Score = 95.9 bits (237), Expect = 7e-25
 Identities = 62/226 (27%), Positives = 110/226 (48%), Gaps = 4/226 (1%)

Query: 52  YLMILLIAVIVWKTVN--LKSMLYSVFFLVIIVMMGLWDTSMITLSLIITSTLIALLLGI 109
           +L+ L +A+I W   +  L + L+      +         ++    L+  S+L A+++G 
Sbjct: 10  WLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIGT 69

Query: 110 PLGIVKAR--SKLVSTLLDPMLDVMQTLPSLAYLIPAVLFFGIGEVPGVIATVIFAMPPA 167
             GI   R        L++ +  V QT P +A L  AV   G G  P +IA +++ + P 
Sbjct: 70  GAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLQPAIIALILYGVLPV 129

Query: 168 IKLTALGIEQVSNELIEVGRAFGGTSWQILTKIELPTAVPSIMMGVNQAIMLSFSMVVIA 227
           ++ T  G+  +   + EV +  G +  Q L K+ELP A P I+ GV  +++++     IA
Sbjct: 130 LQATLAGLGAIDASVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVIINIGTATIA 189

Query: 228 GFIGSGGLGEVIISGIQRYSLAPALEAGIAVTFLAVIFDRITRNLV 273
             +G+  LG  II G+  ++ A  ++  + V   A+I DR+   LV
Sbjct: 190 STVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLV 235