Pairwise Alignments

Query, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

Subject, 294 a.a., Glycine betaine/choline transport system permease protein OusW from Azospirillum sp. SherDot2

 Score =  256 bits (653), Expect = 5e-73
 Identities = 124/268 (46%), Positives = 193/268 (72%), Gaps = 2/268 (0%)

Query: 5   FNLGIGKFLVNLIDFLIDNYSGFFDLISYVIQSGVDFFHFLLFSINPYLMI-LLIAVIVW 63
           F + IGK++  L+ F++D++   FD I+ V+        F+L     +L+I L++A  +W
Sbjct: 3   FEIRIGKWVEELVTFMLDHFQPTFDAIATVVNGFGGAIDFVLVGAPAWLLIGLIVATSLW 62

Query: 64  KTVNLKSMLYSVFFLVIIVMMGLWDTSMITLSLIITSTLIALLLGIPLGIVKARSKLVST 123
           + V +   +++V  L +I  MGLW  +  TL L++T+TL++LL+G+PLG+  AR+++V +
Sbjct: 63  R-VGIGFAVFTVAALSLIAGMGLWTETASTLGLVLTATLLSLLIGVPLGVWMARNRVVES 121

Query: 124 LLDPMLDVMQTLPSLAYLIPAVLFFGIGEVPGVIATVIFAMPPAIKLTALGIEQVSNELI 183
           ++   LD MQT+P+  YLIPAV+FFG+G VPG++ATVIFAMPPA++LT+LGI+QV  E++
Sbjct: 122 IVRTTLDFMQTMPAFVYLIPAVMFFGLGRVPGILATVIFAMPPAVRLTSLGIQQVPAEIV 181

Query: 184 EVGRAFGGTSWQILTKIELPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSGGLGEVIISGI 243
           E G+AFG    Q+L K++LP A+PSIM GVNQ +M++ SM+VIA  IG+GGLG V++ GI
Sbjct: 182 EAGKAFGCHDRQLLFKVQLPNALPSIMAGVNQTMMMALSMIVIASMIGAGGLGNVVLQGI 241

Query: 244 QRYSLAPALEAGIAVTFLAVIFDRITRN 271
           QR  +A   E+G++V  LA++ DRIT++
Sbjct: 242 QRLDIALGFESGLSVVLLAIVLDRITQS 269