Pairwise Alignments

Query, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

Subject, 295 a.a., glycine betaine ABC transporter permease from Agrobacterium fabrum C58

 Score =  189 bits (479), Expect = 8e-53
 Identities = 96/250 (38%), Positives = 158/250 (63%), Gaps = 5/250 (2%)

Query: 24  YSGFFDLISYVIQSGVDFFHFLLFSINPYLMILLIAVIVW---KTVNLKSMLYSVFFLVI 80
           Y G  + +   +QS + +   LL      ++IL++  + W   ++  + S+   + F   
Sbjct: 33  YGGAIEGLFTPLQSFLIWAERLLIGAPWPVVILIVGALAWFASRSATIVSLCCGILFA-- 90

Query: 81  IVMMGLWDTSMITLSLIITSTLIALLLGIPLGIVKARSKLVSTLLDPMLDVMQTLPSLAY 140
           I   G+W+ +M T+S+I    ++++++G+P+GI  ARS  +  +++P+LDVMQT+PS  Y
Sbjct: 91  IGWFGMWEDTMKTVSMIFVCAVMSIVIGLPIGIAMARSNRLQNVVNPVLDVMQTMPSFVY 150

Query: 141 LIPAVLFFGIGEVPGVIATVIFAMPPAIKLTALGIEQVSNELIEVGRAFGGTSWQILTKI 200
           LIP V+  GIG VPGVIA +I+A+PP I+LT LGI  V ++++E   AFG +  Q L K+
Sbjct: 151 LIPVVMLLGIGRVPGVIAVIIYAIPPMIRLTNLGIRMVDHDVLEAADAFGSSKRQKLFKV 210

Query: 201 ELPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSGGLGEVIISGIQRYSLAPALEAGIAVTF 260
           +LP A+P+IM G+NQ IM++ +MVVIA  IG  GLG+ ++  I        +  G+A+  
Sbjct: 211 QLPLALPTIMAGINQTIMMALAMVVIASMIGVQGLGQPVLKAIANQYFTLGVFNGLAIVG 270

Query: 261 LAVIFDRITR 270
           +A+IFDRI++
Sbjct: 271 IAIIFDRISQ 280