Pairwise Alignments

Query, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

Subject, 246 a.a., ABC transporter, membrane spanning protein (proline/glycine/betaine) from Agrobacterium fabrum C58

 Score =  100 bits (248), Expect = 4e-26
 Identities = 60/187 (32%), Positives = 101/187 (54%), Gaps = 2/187 (1%)

Query: 80  IIVMMGLWDTSMITLSLIITSTLIALLLGIPLGIVKARSKLVS--TLLDPMLDVMQTLPS 137
           I     L+  ++  L+++  +T +A L    L ++  R        L   ++++ QT P 
Sbjct: 42  IYTQANLFSLTLSHLTIVAIATGLATLTAGALAVLVTRPFGADFLPLSRSIVNIGQTFPP 101

Query: 138 LAYLIPAVLFFGIGEVPGVIATVIFAMPPAIKLTALGIEQVSNELIEVGRAFGGTSWQIL 197
           +A L  AV   G GE P +IA  ++A+ P  + T  G+  +   +++  R  G T WQ L
Sbjct: 102 VAVLALAVPMIGFGEKPTLIALFLYALLPVFENTLTGLTTLPATVMDAARGSGMTGWQRL 161

Query: 198 TKIELPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSGGLGEVIISGIQRYSLAPALEAGIA 257
           TK+ELP A+P+I+ GV  + ++S S   I   + +  LGEVII+G+Q  +LA  L+ G+ 
Sbjct: 162 TKVELPLALPAILAGVRLSAVISLSTATIGSTVAARTLGEVIIAGLQSNNLAFILQGGLI 221

Query: 258 VTFLAVI 264
           V  LA++
Sbjct: 222 VAALAIL 228