Pairwise Alignments

Query, 295 a.a., glycine betaine ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 315 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  120 bits (300), Expect = 5e-32
 Identities = 78/287 (27%), Positives = 133/287 (46%), Gaps = 12/287 (4%)

Query: 14  LAVMFSGCVQSPQSTDDTEKGTIKFGLPPWPGVTVKSNVVKVILEEQGYNVELNQLDAGI 73
           LA M S  V +  + +  +  T+ F    W  +TV +     IL+  GY      +   +
Sbjct: 9   LAAMLSLPVMA-HAAEPAQCQTVNFSDVGWTDITVTTATTSEILKGLGYKPRTTMISVPV 67

Query: 74  TYAKLADG-DLDVSLAGWLPTTHEEYWTQY--GNQLEMVHVNVGKTALGLAVPTYTYEAG 130
           TY  LADG ++DV L  W+PT   +   QY     +E V  N+      LAVP   Y  G
Sbjct: 68  TYKSLADGKNMDVFLGNWMPTMENDI-KQYRDAGTVETVRANLENAKYTLAVPEALYNKG 126

Query: 131 IQSITDLNGNEELFDGKIIGIEPGAGIMSNTEKAIDSYSL----SGYELQSSSTPAMMAE 186
           ++   D+   ++   GKI GIEPG       +  ID  +     +G+++  SS   M+++
Sbjct: 127 LKDFADIAKFKDELGGKIYGIEPGNDGNRTIQTLIDKDAFGLKTAGFKVVESSEAGMLSQ 186

Query: 187 LARAINEDENIVVTVWEPHSVFFKFDIKMLDDPEKVYGDG---DKVYTIARTDFKDDYPE 243
           + RA   D+ IV   WEPH +  +F +K L   +  +G       +YT  R  + ++   
Sbjct: 187 VERATKRDQAIVFLGWEPHPMNTRFKMKYLTGGDDSFGPNYGQATIYTNTRKGYTEECSN 246

Query: 244 VYEFFQKFEVDPSVQSEWIYKYSDEGMDPEEVAEEWVANNPELVENW 290
           V +  +      +++S  +    D+ M P+  A+ W+  NP++++ W
Sbjct: 247 VGQLLKNLVFTLNMESTLMGNVLDDKMKPDAAAKAWLKKNPQVLDTW 293