Pairwise Alignments

Query, 295 a.a., glycine betaine ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 311 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  110 bits (275), Expect = 4e-29
 Identities = 70/262 (26%), Positives = 120/262 (45%), Gaps = 8/262 (3%)

Query: 36  IKFGLPPWPGVTVKSNVVKVILEEQGYNVELNQLDAGITYAKLADGDLDVSLAGWLPTTH 95
           I+ G+  W  V   S +  V+L   GY+ +       I +A + D  LD+ L  W P   
Sbjct: 29  IRMGVVSWTDVVATSGMADVLLNGLGYDSKQTSAVQQIIFAGIRDKRLDIFLGYWKPAMD 88

Query: 96  EEYWTQYGNQLEMVH--VNVGKTALGLAVPTYTYEAGIQSITDLNGNEELFDGKIIGIEP 153
                    +   V    ++      LAVP Y  +AG+++  D+   ++   GKI GIEP
Sbjct: 89  NNIAPFLAAKQVKVFDTPSLADAQATLAVPQYVADAGLKTFADIARFKDKLGGKIYGIEP 148

Query: 154 GAGIMSNTEKAIDS--YSLSGYELQSSSTPAMMAELARAINEDENIVVTVWEPHSVFFKF 211
           G+G  ++ +K ID+  + L G++L +S    M+A + RA+N  E +V   W PH +    
Sbjct: 149 GSGANTDIQKMIDTNRFGLGGFKLVASGEAGMLAAVQRAVNRKEFVVFVGWTPHPMNINM 208

Query: 212 DIKMLDDPEKVYGDGD---KVYTIARTDFKDDYPEVYEFFQKFEVDPSVQSEWIYKYSDE 268
            +  L   E V+G  +    V T+   DF    P      +      + +S+ +     E
Sbjct: 209 KMAYLTGSEDVFGPDEGRATVSTVTAPDFAQRCPNANRVLENLTFTAAQESQLMVPIM-E 267

Query: 269 GMDPEEVAEEWVANNPELVENW 290
              P++VA +W+ ++PE ++ W
Sbjct: 268 RESPQDVARQWLRDHPEDLQRW 289