Pairwise Alignments

Query, 295 a.a., glycine betaine ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 287 a.a., choline / betaine / carnitine ABC transporter - substrate binding protein BetX from Pseudomonas putida KT2440

 Score =  171 bits (432), Expect = 2e-47
 Identities = 94/250 (37%), Positives = 138/250 (55%), Gaps = 5/250 (2%)

Query: 43  WPGVTVKSNVV-KVILEEQGYNVELNQLDAGITYAKLADGDLDVSLAGWLPTTHEEYWTQ 101
           W      +NV  +VI ++ GY+V+L  +  GI +  +A G LD  L+ WLP TH EYW +
Sbjct: 40  WADSVATTNVAAEVIKQKLGYDVKLQAVATGIMWQGVATGKLDAMLSAWLPVTHGEYWAK 99

Query: 102 YGNQLEMVHVNVGKTALGLAVPTYTYEAGIQSITDLNGNEELFDGKIIGIEPGAGIMSNT 161
             + +     N     +GL VP Y       SI DL   +  F  +I+GI+ G+G+M  T
Sbjct: 100 NKDNVVDYGPNFKDAKIGLIVPEYVKAV---SIADLK-TDNSFKDRIVGIDAGSGVMLKT 155

Query: 162 EKAIDSYSLSGYELQSSSTPAMMAELARAINEDENIVVTVWEPHSVFFKFDIKMLDDPEK 221
           ++AI  Y L+ Y+LQ+SS  AM AEL RA  + ++I VT W PH +F K+ +K L+DP+ 
Sbjct: 156 DQAIKDYGLTSYKLQASSGAAMTAELGRAYAKQQSIAVTGWVPHWMFAKWKLKFLEDPKG 215

Query: 222 VYGDGDKVYTIARTDFKDDYPEVYEFFQKFEVDPSVQSEWIYKYSDEGMDPEEVAEEWVA 281
           VYG  + V +I   +     PEV EF +KF      +   +     EG  PE  A++WVA
Sbjct: 216 VYGAAETVNSIGSKELATKAPEVAEFLKKFNWQSKDEIGEVMLAIQEGAKPEAAAKDWVA 275

Query: 282 NNPELVENWT 291
            +P+ V+ WT
Sbjct: 276 KHPDRVKEWT 285