Pairwise Alignments

Query, 295 a.a., glycine betaine ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 315 a.a., choline ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  122 bits (307), Expect = 8e-33
 Identities = 79/297 (26%), Positives = 137/297 (46%), Gaps = 11/297 (3%)

Query: 1   MKYGTLFAIFLLGLAVMFSGCVQSPQSTDDTEKGTIKFGLPPWPGVTVKSNVVKVILEEQ 60
           MK   +  + LL +A  F     S  + DD    T+    P W  +   + +  V+L   
Sbjct: 1   MKMKRITQLVLLAVAGWFP---LSSFAVDDARCATVTQSDPGWTDIAATNAISGVVLNAL 57

Query: 61  GYNVELNQLDAGITYAKLADGDLDVSLAGWLPTTHE--EYWTQYGNQLEMVHVNVGKTAL 118
           GY  ++  L   + +  L  G +DV L  W+P        +T  G+ + ++  N+     
Sbjct: 58  GYQQKVQNLSVALAFQGLKTGQVDVFLGNWMPAQAPVISKFTADGS-ISVLGANLPAARF 116

Query: 119 GLAVPTYTYEAGIQSITDLNGNEELFDGKIIGIEPGAGIMSNTEKAIDS--YSLSGYELQ 176
            LAVP Y   AG++   DL      FD KI GI PGA    + +K ID+  ++L  + L 
Sbjct: 117 TLAVPDYVAAAGVKDFADLQKYANQFDHKIYGIAPGAPANQSLKKMIDAHDFALQNWSLV 176

Query: 177 SSSTPAMMAELARAINEDENIVVTVWEPHSVFFKFDIKMLDDPEKVYGDG---DKVYTIA 233
            SS   M+A++ RA+   + IV   WEPH++  +F +  L   +  +G       V T+ 
Sbjct: 177 ESSESGMLAQVTRAVERKQWIVFLGWEPHAMNTRFKLAYLSGGDNYFGANYGRATVNTVT 236

Query: 234 RTDFKDDYPEVYEFFQKFEVDPSVQSEWIYKYSDEGMDPEEVAEEWVANNPELVENW 290
           R DF    P +  F+ +   D ++++  I +  ++    ++ A + +   PEL+++W
Sbjct: 237 RKDFAATCPNLNRFYSQLTFDVALENAVIARVLEQQQTAQDAARDELKKRPELLDSW 293