Pairwise Alignments

Query, 295 a.a., glycine betaine ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 308 a.a., ABC transporter, substrate binding protein (glycine betaine) from Agrobacterium fabrum C58

 Score =  114 bits (285), Expect = 3e-30
 Identities = 72/260 (27%), Positives = 115/260 (44%), Gaps = 6/260 (2%)

Query: 36  IKFGLPPWPGVTVKSNVVKVILEEQGYNVELNQLDAGITYAKLADGDLDVSLAGWLPTTH 95
           ++   P W  +   + +   +L+   Y  +   L   + Y  L   DLDV +  W P   
Sbjct: 28  VRMAEPGWNDLAFTTGIAMTLLKSLHYQPQSQLLGIDVIYTSLKSKDLDVFMGYWDPAM- 86

Query: 96  EEYWTQY--GNQLEMVHVNVGKTALGLAVPTYTYEAGIQSITDLNGNEELFDGKIIGIEP 153
             Y+  Y     +E V  N+       AVPTY +EAG++  +DL    + FD K+ GIEP
Sbjct: 87  VNYYKPYKEDGSVEKVRTNLVGAKYTFAVPTYVWEAGVKDFSDLQKFADKFDRKLYGIEP 146

Query: 154 GAGIMSNTEKAIDSYSLSGYELQSSSTPAMMAELARAINEDENIVVTVWEPHSVFFKFDI 213
           G+  +        +  L  +E+  SS   M++++AR       IV   W PH +  KFDI
Sbjct: 147 GSNQLMLDAVKDPALGLKDWEVVESSEQGMLSQVARFNRNKTFIVFQGWAPHPMNAKFDI 206

Query: 214 KMLDDPEKVYG---DGDKVYTIARTDFKDDYPEVYEFFQKFEVDPSVQSEWIYKYSDEGM 270
           K L   +K YG       V T  R  +  + P V +  Q  E D   +++ +    + G+
Sbjct: 207 KYLTGGDKFYGPDFGAATVDTQVRRGYLQECPNVAKLLQNLEFDVEFENKGMDLIMNGGL 266

Query: 271 DPEEVAEEWVANNPELVENW 290
            PE+ A + +   P  +E W
Sbjct: 267 SPEDAAAQAIKAEPHRLETW 286