Pairwise Alignments

Query, 388 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 586 a.a., putative Sodium/proton antiporter from Pseudomonas putida KT2440

 Score =  109 bits (273), Expect = 2e-28
 Identities = 91/398 (22%), Positives = 184/398 (46%), Gaps = 32/398 (8%)

Query: 2   DISWVLFTVGVCLIFGKIGNEIMWRFGFPSVFGEILIGIIFG-NLLFFGIVDSSHLTLHE 60
           D++ ++   GV  I       +  RF  P V G I+ G I G +   FG++       H+
Sbjct: 9   DLAVIMLVAGVVTI-------LFHRFKQPVVLGYIVAGFIIGPHTPPFGLI-------HD 54

Query: 61  NDIFDFLSTVGIMFLLFISGLEIDIHRLKKTENISIVAAVLGAVFPLIFGYISLSYFGYT 120
            D    L+ +G++FL+F  GLE  + +L K    + +AA L  V  +  G+    +FG++
Sbjct: 55  EDTIKTLAELGVIFLMFCLGLEFSLRKLFKVGATAFIAAFLEIVLMIWIGFEIGRWFGWS 114

Query: 121 AKESIVGGVILTATSIGITARLLMDLKVLKTDVGAAAISASILDDFLGLILLIL------ 174
             +S+  G IL  +S  I  + L DLK+             I++D LG+ ++ L      
Sbjct: 115 TMDSLFLGAILAISSTTIIVKALNDLKMKNERFAQLIFGVLIVEDILGIGIIALLSGIAV 174

Query: 175 --AVGSGSLLGLISEITVFFIITGYFGWKLIKKYLIFAEKFHIEKTVLSFTIALMFLFSF 232
              V SG +   + ++++F ++    G  L+ + L +  +F   + +L   + L F F  
Sbjct: 175 SGTVSSGEVFSTVGKLSLFMVVALVIGILLVPRLLAYVARFESNEMLLITVLGLCFGFCL 234

Query: 233 LSESWFEVAIEGAFMAGLILSKTSEGKTLAKEIKSIGNSFLIPLFFIYTGARLNLTAFLN 292
           L        + GAF+ G I++++ +   + + I+ + + F   +FF+  G  ++    ++
Sbjct: 235 LVVKLEYSMVLGAFLIGAIMAESRQLLKIERLIEPVRDLF-SAIFFVAIGMMIDPEVLID 293

Query: 293 HE-ALILATIFIIVGVFTKFVGWGLGAKIM---GKWDLKKSIQLASASVPRAEIALINLM 348
           +   +++ T+ +++G   K +  G+GA I    G+  L+  + L+        IA + + 
Sbjct: 294 YAWPIVVITLAVVLG---KMLSCGMGAFIAGNDGRTSLRVGMGLSQIGEFSFIIAALGMT 350

Query: 349 IAVSAGVILEENISKFIAATLIFVTFSIVITPPLLKKV 386
           + V++  +    ++   A T +   + I    PL +K+
Sbjct: 351 LQVTSDFLYPVAVA-VSAITTLLTPYLIRAADPLSQKL 387