Pairwise Alignments

Query, 388 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 542 a.a., cation:proton antiporter from Methanococcus maripaludis S2

 Score = 80.5 bits (197), Expect = 1e-19
 Identities = 96/371 (25%), Positives = 167/371 (45%), Gaps = 50/371 (13%)

Query: 30  PSVFGEILIGIIFGNLLFFGIVDSSHLTLHENDIFDFLSTVGIMFLLFISGLEIDIHRLK 89
           P + G IL GI+     F  IV          +    L   G+  LLF+ G+ ++    K
Sbjct: 5   PLIIGYILTGILVSPY-FLNIV-------RFEESISTLGHYGVTILLFMVGISLNPGYFK 56

Query: 90  KTENISIVAAVLGAVFPLIFGYISLSYFGYTAKESIVGGVILTATSIGITARLLMDLKVL 149
           +   IS++  +   +F    G++   + GY+  ES+   + LT +S  I  +L+ D   +
Sbjct: 57  EIGKISLITGLGQILFTFSIGFLISVFLGYSLIESMYISIALTFSSTIIIMKLISDKGDI 116

Query: 150 KTDVGAAAISASILDDFLGLILLIL------AVGSGSLLGLISE-----ITVFFIITGYF 198
               G  +I   I+ D + + +L+L        G+G LL LI       +T  +I T Y 
Sbjct: 117 DKLYGKISIGFLIVQDIVAMAILVLISAFNVQSGAGELLFLIISKIVLILTAIYIFTKY- 175

Query: 199 GWKLIKKYLIFAEK----FHIEKTVLSFTIALMF-LFSFLSESWFEVAIEGAFMAGLILS 253
               +  ++ +A K      +   +  FT+A +F L  F SE        GA +AG++L+
Sbjct: 176 ---ALSNFISYASKNQEFLFLFSLMWCFTLASLFHLLGFSSEI-------GALIAGIVLA 225

Query: 254 KTSEGKTLAKEIKSIGNSFLIPLFFIYTGARLNLTAFLNHEALILATIFIIVGVFTKFVG 313
              E   +A +++ + + FLI LFF+  G ++      N   +I A   II+ +F  F  
Sbjct: 226 IFPERYEIASKVRPLRDFFLI-LFFVVLGVQMTFETSGNF--IIPA---IILSIFVLFGN 279

Query: 314 WGLGAKIMGKWD-LKKSIQLASASVPR-AEIALINLMIAVSAGVILEENISKF------- 364
             +   +MG +   KK+  LA  +V + +E +LI   + +  G I +E +S         
Sbjct: 280 PIIVMILMGAFGYTKKTGFLAGLTVAQISEFSLIIASLGLRNGHISQEIVSMITLIGIMT 339

Query: 365 IAATLIFVTFS 375
           IA +  F+T+S
Sbjct: 340 IAGSSYFITYS 350