Pairwise Alignments

Query, 458 a.a., nitrogenase from Methanococcus maripaludis S2

Subject, 479 a.a., Nitrogenase molybdenum-iron protein beta chain from Xanthobacter sp. DMC5

 Score =  244 bits (624), Expect = 3e-69
 Identities = 147/435 (33%), Positives = 244/435 (56%), Gaps = 26/435 (5%)

Query: 4   KKFAVINPCKICQPMGAIFALMGVKNSMPLIHGSHGCSTYMRFQLGRHFKEAVNVASSSM 63
           KK   +NP K+ QP+G   A MG++ +MPL+HGS GC+++      RHFKEA+ + +++M
Sbjct: 8   KKSCAVNPLKMSQPIGGALAFMGLRGAMPLLHGSQGCTSFGLVLFVRHFKEAIPLQTTAM 67

Query: 64  SEANAVLGGEENLKHAIRNVSKIYGPEIIGVTTSCLSETIGDDVEGIIRLFKTQNDDLPE 123
           SE   VLGG +N++ AI N+     PEIIG+ ++ ++ET GDDV+G I+L + +   L +
Sbjct: 68  SEVATVLGGYDNVEQAILNIYNRTKPEIIGICSTGVTETKGDDVDGYIKLIREKYPQLAD 127

Query: 124 --IVPISTPSYKHTHVEGYDSTVKALVENLATPSKPNS-----KLNVITGM-VSPGDIAE 175
             +V +STP +K    +G++ TV  +VE L    +P++     ++NV+ G  + PGD+ E
Sbjct: 128 FPLVYVSTPDFKDAFQDGWEKTVAKIVEVLVKKPEPDAPKNPKRVNVLPGCHLQPGDLDE 187

Query: 176 TKRILREMGIESIILTDTSESMDAPFDGEVSFVSSAGTTVEELKDTANSFATISLCKHAN 235
            + IL + G+E   L D + S+D     + +  +  G  V+E+     +  TI++     
Sbjct: 188 LRCILEDFGLEPSFLPDLAGSLDGHIPDDFTPTTIGGIGVDEVATMGEAAWTIAIGSQMK 247

Query: 236 SAAKFLHEAYGINSVSPYLPI----GLQSTDEFMNELCKLTNKEIPEQITRERGKLIDAM 291
           +AA+ + +  G    +PY       GL   DEF   L +++ +E+P +  R+RG+L+DAM
Sbjct: 248 TAAEAMQKKTG----TPYRLFERLCGLGPNDEFFMFLSEISGREVPRRYRRQRGQLVDAM 303

Query: 292 IDAHQHNFGRKVAIYGDPDVVVGFTRFVLELGMIPSIVCTGSESKTFVEDIKAVTKDSKH 351
           +DAH H  GRK+AI  +PD++      + E+G   +   T ++S  F        +    
Sbjct: 304 LDAHFHLGGRKLAIGAEPDLLFDVASALHEMGTHITAAVTTTQSPVF--------EKLPC 355

Query: 352 KPVILAPGDLYDLHQEIKKSKVDLLIGNSYGSRIAGAENIPLIRMGFPIYDRVGAQRITS 411
             V+L  GDL DL    K+   DLL+ +S+G + A   NIP  R+G P++DR+G+    +
Sbjct: 356 DEVLL--GDLEDLETLAKERGCDLLLTHSHGRQAADRLNIPFYRIGIPMFDRIGSGHKMT 413

Query: 412 LGYTAGIRLVDTITN 426
           +GY     L+ T+ N
Sbjct: 414 VGYRGTRDLMFTLAN 428