Pairwise Alignments

Query, 458 a.a., nitrogenase from Methanococcus maripaludis S2

Subject, 501 a.a., Nitrogenase molybdenum-iron protein alpha chain from Xanthobacter sp. DMC5

 Score = 47.0 bits (110), Expect = 1e-09
 Identities = 78/338 (23%), Positives = 137/338 (40%), Gaps = 59/338 (17%)

Query: 27  VKNSMPLIHGSHGCSTYMRFQLGRHFKEAVNVAS-------SSMSEANAVLGGEENLKHA 79
           +K+ + + HG  GC  Y       ++     + +       S   E + V GG++ L   
Sbjct: 80  IKDMIHISHGPVGCGQYSWAARRNYYIGTTGIDTFVTMQFTSDFQEKDIVFGGDKKLAKI 139

Query: 80  IRNVSKIYGPEIIGVT--TSCLSETIGDDVEGIIRLFKTQNDDLPEIVPISTPSYKHT-- 135
           +  + +++ P   G+T  + C    IGDD+E + +  K++  D   IVP+    ++    
Sbjct: 140 MDEIQELF-PLNNGITVQSECPIGLIGDDIEAVSKA-KSKEYDGKTIVPVRCEGFRGVSQ 197

Query: 136 ----HVEG---YDSTVKALVENLATPSKPNSKLNVITGMVSPGDIAETKRI-LREMGIES 187
               H+      D     L  N A P +P+     I G  + G  A + RI L EMG+  
Sbjct: 198 SLGHHIANDAVRDWVFDKLDPNKAPPFEPSPYDVAIIGDYNIGGDAWSSRILLEEMGLRV 257

Query: 188 IILTDTSESMDAPFDGEVSFVSSAGTTVEELKDTANSFATISLC-KHANSAAKFLHEAYG 246
           I          A + G+ S        + EL++T  +   +  C +  N  ++ + E +G
Sbjct: 258 I----------AQWSGDGS--------LAELENTPRAKLNVLHCYRSMNYISRHMEEKFG 299

Query: 247 INSVSPYLPIGLQSTDEFMNELCKLTN------KEIPEQITRERGKLIDAMIDAHQHNF- 299
           I    P+         +    L K+        KE  E++  +   L+DA+I  ++    
Sbjct: 300 I----PWCEYNFFGPSKIAESLRKIAAYFDDKIKEGAERVIAKYAPLMDAVIAKYRPRLE 355

Query: 300 GRKVAIYGD---PDVVVGFTRFVLELGMIPSIVCTGSE 334
           G+ V +Y     P  V+G      +LGM   +V TG E
Sbjct: 356 GKTVMLYVGGLRPRHVIGAYE---DLGM--EVVGTGYE 388