Pairwise Alignments

Query, 480 a.a., nitrogenase iron-molybdenum cofactor biosynthesis protein NifE from Methanococcus maripaludis S2

Subject, 519 a.a., Nitrogenase molybdenum-iron protein beta chain from Xanthobacter sp. DMC5

 Score = 65.5 bits (158), Expect = 4e-15
 Identities = 108/434 (24%), Positives = 162/434 (37%), Gaps = 57/434 (13%)

Query: 72  RSCVYGGARVVLMPITDAVHLVHGPIGCAACTWDIRGSKSTGDKLYKNGFSTDLQEKDIV 131
           ++C   GA  V +     +  VHG  GC A     R   S   K   +  S+ + E   V
Sbjct: 68  KACQPLGAVFVAVGFEHTIPFVHGSQGCVAY---YRSHLSRHFKEPSSCVSSSMTEDAAV 124

Query: 132 FGGEKKLYESILEVNKLYHPGAIFVYSTCVVGLIGDDLKAVCRQAQEATGCRV---IPVQ 188
           FGG   + + +     +Y P  I V +TC+  +IGDDL A  + A+E         +P  
Sbjct: 125 FGGLNNMIDGLANTYNMYKPKMIAVSTTCMAEVIGDDLNAFIKTAKEKGSVPQEYDVPFA 184

Query: 189 SEGFKSFNKTAGHKLACDAMLDYV----IGT-----EEPEEEHPYSINIIGEFN--VAGD 237
                  +   G+  A   +L++      GT      EP E+    IN IG F+    G+
Sbjct: 185 HTPAFVGSHVTGYDNAIKGVLEHFWDGKAGTAPKLVREPNEK----INFIGGFDGYTVGN 240

Query: 238 LWGIIPLYEKMGV---------KVHTAIT--------GDSTVAKVASAHRSKLNIVQCQK 280
           L  +  ++  MGV         +V    T        G +T+ + A+A  +K  I   Q+
Sbjct: 241 LREVKRIFGLMGVDYTILGDNSEVFDTPTDGEFRMYDGGTTLEEAANAVHAKATI-SMQE 299

Query: 281 SSNYLAAQMEKKYGIPSIKVNF-FGLDETTKSLRAVAEFFGDEEMIKRTEELIKSEIKNL 339
                       +G   +  N   G+  T + L A+A   G E      EEL K E   L
Sbjct: 300 YCTEKTLPFIANHGQEVVAFNHPVGVKGTDEFLMAIARISGKE----IPEELAK-ERGRL 354

Query: 340 RDEISEYKKDLSGRTVAIYSGAHKSWALVSAFGELDMEIIMSGTQNGK---PEDYQQIRD 396
            D I++    + G+  AIY        L S   EL  E       NG     +  Q++ D
Sbjct: 355 VDAIADSNAHIHGKKFAIYGDPDLCLGLASFLLELGAEPTHVLATNGNQKWADKVQKLFD 414

Query: 397 H--VCEGTLIVDDASSMELVQLLKEYKPDILISGAKEKYLS-------LKSGIPHCDFNH 447
                +   +        +  LL     D LI     KYL        ++ G P  D +H
Sbjct: 415 SSPFGQNCNVYPGRDLWHMRSLLFTEPVDFLIGNTYGKYLERDTGTPLIRIGFPVFDRHH 474

Query: 448 DRITAFSGYQGFIN 461
                  GYQG +N
Sbjct: 475 HHRRPVWGYQGGMN 488