Pairwise Alignments

Query, 480 a.a., nitrogenase iron-molybdenum cofactor biosynthesis protein NifE from Methanococcus maripaludis S2

Subject, 501 a.a., Nitrogenase molybdenum-iron protein alpha chain from Xanthobacter sp. DMC5

 Score =  298 bits (764), Expect = 2e-85
 Identities = 165/453 (36%), Positives = 271/453 (59%), Gaps = 17/453 (3%)

Query: 42  KARESQMCVSGKDDSIPTCDKNSTPGMITQRSCVYGGAR-VVLMPITDAVHLVHGPIGCA 100
           +A+   +  SGK D     +  S PG++T R C Y G++ VV  PI D +H+ HGP+GC 
Sbjct: 35  RAKHLNVHESGKSDCGVKSNIKSIPGVMTIRGCAYAGSKGVVWGPIKDMIHISHGPVGCG 94

Query: 101 ACTWDIRGSKSTG----DKLYKNGFSTDLQEKDIVFGGEKKLYESILEVNKLYH-PGAIF 155
             +W  R +   G    D      F++D QEKDIVFGG+KKL + + E+ +L+     I 
Sbjct: 95  QYSWAARRNYYIGTTGIDTFVTMQFTSDFQEKDIVFGGDKKLAKIMDEIQELFPLNNGIT 154

Query: 156 VYSTCVVGLIGDDLKAVCR-QAQEATGCRVIPVQSEGFKSFNKTAGHKLACDAMLDYVIG 214
           V S C +GLIGDD++AV + +++E  G  ++PV+ EGF+  +++ GH +A DA+ D+V  
Sbjct: 155 VQSECPIGLIGDDIEAVSKAKSKEYDGKTIVPVRCEGFRGVSQSLGHHIANDAVRDWVFD 214

Query: 215 TEEPE-----EEHPYSINIIGEFNVAGDLWGIIPLYEKMGVKVHTAITGDSTVAKVASAH 269
             +P      E  PY + IIG++N+ GD W    L E+MG++V    +GD ++A++ +  
Sbjct: 215 KLDPNKAPPFEPSPYDVAIIGDYNIGGDAWSSRILLEEMGLRVIAQWSGDGSLAELENTP 274

Query: 270 RSKLNIVQCQKSSNYLAAQMEKKYGIPSIKVNFFGLDETTKSLRAVAEFFGDEEMIKRTE 329
           R+KLN++ C +S NY++  ME+K+GIP  + NFFG  +  +SLR +A +F D+  IK   
Sbjct: 275 RAKLNVLHCYRSMNYISRHMEEKFGIPWCEYNFFGPSKIAESLRKIAAYFDDK--IKEGA 332

Query: 330 ELIKSEIKNLRDE-ISEYKKDLSGRTVAIYSGAHKSWALVSAFGELDMEIIMSGTQNGKP 388
           E + ++   L D  I++Y+  L G+TV +Y G  +   ++ A+ +L ME++ +G +    
Sbjct: 333 ERVIAKYAPLMDAVIAKYRPRLEGKTVMLYVGGLRPRHVIGAYEDLGMEVVGTGYEFAHN 392

Query: 389 EDYQQIRDH-VCEGTLIVDDASSMELVQLLKEYKPDILISGAKEKYLSLKSGIPHCDFNH 447
           +DYQ+   H V +GTLI DD +  E  + +++ +PD++ SG KEKY+  K G+P    + 
Sbjct: 393 DDYQRTAQHYVKDGTLIYDDVTGYEFEKFVEKVQPDLVGSGIKEKYVFQKMGVPFRQMHS 452

Query: 448 -DRITAFSGYQGFINFARVVHTAVMTPIWRLSR 479
            D    + GY GF  FAR +  A+ +P+W++++
Sbjct: 453 WDYSGPYHGYDGFAIFARDMDMAINSPVWKMTK 485