Pairwise Alignments

Query, 480 a.a., nitrogenase iron-molybdenum cofactor biosynthesis protein NifE from Methanococcus maripaludis S2

Subject, 485 a.a., nitrogenase molybdenum-iron protein alpha chain from Magnetospirillum magneticum AMB-1

 Score =  305 bits (780), Expect = 3e-87
 Identities = 170/440 (38%), Positives = 266/440 (60%), Gaps = 16/440 (3%)

Query: 50  VSGKDDSIPTC----DKNSTPGMITQRSCVYGGAR-VVLMPITDAVHLVHGPIGCAACTW 104
           V  +++  PTC    +  S PG++T R C Y GA+ VV  P+ D VH+ HGPIGC   +W
Sbjct: 38  VKTEENGTPTCGVKSNIKSVPGVMTVRGCAYAGAKGVVWGPVKDMVHISHGPIGCGQYSW 97

Query: 105 DIRGSKSTG----DKLYKNGFSTDLQEKDIVFGGEKKLYESILEVNKLYH-PGAIFVYST 159
             R +  TG    D       ++D QE+DIVFGG+K L   I E++ L+     I V S 
Sbjct: 98  SQRRNYFTGTVGIDSFVTMQVTSDFQERDIVFGGDKNLEVMIDELDGLFPLNNGISVLSE 157

Query: 160 CVVGLIGDDLKAVCRQAQEATGCRVIPVQSEGFKSFNKTAGHKLACDAMLDYVI--GTEE 217
           C +GLIGDD++AV ++  +  G +V+PV+ EGF+  +++ GH +A DA+ D+V   GTEE
Sbjct: 158 CPIGLIGDDIEAVAKKKAKDIGKKVVPVRCEGFRGVSQSLGHHIANDAIRDWVFEKGTEE 217

Query: 218 PEEEHPYSINIIGEFNVAGDLWGIIPLYEKMGVKVHTAITGDSTVAKVASAHRSKLNIVQ 277
                PY +N+I ++N+ GD W    L E++G++V  + +GD+T+A++  A ++KLN++ 
Sbjct: 218 EWATGPYDVNLIADYNIGGDAWPSRKLLEEIGLRVIGSWSGDATLAEIERAPKAKLNLIH 277

Query: 278 CQKSSNYLAAQMEKKYGIPSIKVNFFGLDETTKSLRAVAEFFGDEEMIKRTEELIKSEIK 337
           C +S NY+   ME+KYG+P I+ NFFG  +   SLR +A  F DE + K+ EE+I ++ +
Sbjct: 278 CYRSMNYICRHMEEKYGMPWIEYNFFGPTQIAASLRKIAAAF-DETIQKKAEEVI-AKYQ 335

Query: 338 NLRDEI-SEYKKDLSGRTVAIYSGAHKSWALVSAFGELDMEIIMSGTQNGKPEDYQQIRD 396
            L D + + +K  L G+TV +Y G  +     +A+ +L M+I+ SG +    +DYQ+   
Sbjct: 336 PLVDAVTARFKPRLDGKTVMLYVGGLRPRHTATAYEDLGMKIVGSGYEFAHNDDYQRTAT 395

Query: 397 HVCEGTLIVDDASSMELVQLLKEYKPDILISGAKEKYLSLKSGIPHCDFNH-DRITAFSG 455
           ++ EGTLI DD S  EL + +++ +PD++ SG KEKY + K G+P    +  D    + G
Sbjct: 396 YLKEGTLIYDDVSEFELEKFIEQLRPDLVGSGIKEKYSTQKMGVPFRQMHSWDYSGPYHG 455

Query: 456 YQGFINFARVVHTAVMTPIW 475
           Y GF  FAR +  A+  P+W
Sbjct: 456 YDGFAIFARDMDMAINAPVW 475