Pairwise Alignments

Query, 477 a.a., nitrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 501 a.a., Nitrogenase molybdenum-iron protein alpha chain from Xanthobacter sp. DMC5

 Score =  332 bits (851), Expect = 2e-95
 Identities = 189/478 (39%), Positives = 275/478 (57%), Gaps = 22/478 (4%)

Query: 9   DKDIPEREQHIYIKDSKEPKGHCKQRCNTNTIPGSMTERGCAFAGVKGVITGAIKDVLHV 68
           +K    R +H+ + +S   K  C  + N  +IPG MT RGCA+AG KGV+ G IKD++H+
Sbjct: 29  EKTAKRRAKHLNVHESG--KSDCGVKSNIKSIPGVMTIRGCAYAGSKGVVWGPIKDMIHI 86

Query: 69  VHSPVGCTAYGNGTTKRYPTRPEMPDGSVFPVENFNLKHIVGTDLTESDVVFGGMNKLKK 128
            H PVGC  Y     + Y       D   F    F       +D  E D+VFGG  KL K
Sbjct: 87  SHGPVGCGQYSWAARRNYYIGTTGID--TFVTMQFT------SDFQEKDIVFGGDKKLAK 138

Query: 129 VIREASKEFPFVNAIYVYATCTTGLIGDDLDAVCKEMQAEL-GKDVVAFNAPGFAGPTQS 187
           ++ E  + FP  N I V + C  GLIGDD++AV K    E  GK +V     GF G +QS
Sbjct: 139 IMDEIQELFPLNNGITVQSECPIGLIGDDIEAVSKAKSKEYDGKTIVPVRCEGFRGVSQS 198

Query: 188 KGHHVGNYTI----FEKLVGTKEPP-KTTDYDINLIGEYNIDGDYWVLEKYFEDMGINVL 242
            GHH+ N  +    F+KL   K PP + + YD+ +IG+YNI GD W      E+MG+ V+
Sbjct: 199 LGHHIANDAVRDWVFDKLDPNKAPPFEPSPYDVAIIGDYNIGGDAWSSRILLEEMGLRVI 258

Query: 243 SKFTGDATHGELCWMHKAKLSLVRCQRSATYVAKLIEEKYGVPYLKVDFFGPEYCAENLR 302
           ++++GD +  EL    +AKL+++ C RS  Y+++ +EEK+G+P+ + +FFGP   AE+LR
Sbjct: 259 AQWSGDGSLAELENTPRAKLNVLHCYRSMNYISRHMEEKFGIPWCEYNFFGPSKIAESLR 318

Query: 303 AVGKYFGKEIE--AEAVIKKEMEKIQPELDFYKSKLQGKKIWISAGGPKSWHLSKPIEQY 360
            +  YF  +I+  AE VI K    +   +  Y+ +L+GK + +  GG +  H+    E  
Sbjct: 319 KIAAYFDDKIKEGAERVIAKYAPLMDAVIAKYRPRLEGKTVMLYVGGLRPRHVIGAYED- 377

Query: 361 LGMDVVALSGLFEHEDGYEK-MQERAKDGTIIIDDPNTLEMEEVVEKYQPEIVLGGIKEK 419
           LGM+VV     F H D Y++  Q   KDGT+I DD    E E+ VEK QP++V  GIKEK
Sbjct: 378 LGMEVVGTGYEFAHNDDYQRTAQHYVKDGTLIYDDVTGYEFEKFVEKVQPDLVGSGIKEK 437

Query: 420 YFFHKLGVPSVMIHSYE-NGPYIGFEGFVNMARDIYTAIYNPAWKLMEFE-EEEPGDS 475
           Y F K+GVP   +HS++ +GPY G++GF   ARD+  AI +P WK+ +   ++ PG +
Sbjct: 438 YVFQKMGVPFRQMHSWDYSGPYHGYDGFAIFARDMDMAINSPVWKMTKAPWKQAPGQA 495