Pairwise Alignments

Query, 477 a.a., nitrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 480 a.a., nitrogenase iron-molybdenum cofactor biosynthesis protein NifE from Methanococcus maripaludis S2

 Score =  299 bits (765), Expect = 2e-85
 Identities = 152/433 (35%), Positives = 256/433 (59%), Gaps = 18/433 (4%)

Query: 35  CNTNTIPGSMTERGCAFAGVKGVITGAIKDVLHVVHSPVGCTAYGNGTTKRYPTRPEMPD 94
           C+ N+ PG +T+R C + G + V+   I D +H+VH P+GC A        +  R     
Sbjct: 60  CDKNSTPGMITQRSCVYGGAR-VVLMPITDAVHLVHGPIGCAAC------TWDIRGSKST 112

Query: 95  GSVFPVENFNLKHIVGTDLTESDVVFGGMNKLKKVIREASKEFPFVNAIYVYATCTTGLI 154
           G       F+      TDL E D+VFGG  KL + I E +K +    AI+VY+TC  GLI
Sbjct: 113 GDKLYKNGFS------TDLQEKDIVFGGEKKLYESILEVNKLY-HPGAIFVYSTCVVGLI 165

Query: 155 GDDLDAVCKEMQAELGKDVVAFNAPGFAGPTQSKGHHVGNYTIFEKLVGTKEPPKTTDYD 214
           GDDL AVC++ Q   G  V+   + GF    ++ GH +    + + ++GT+EP +   Y 
Sbjct: 166 GDDLKAVCRQAQEATGCRVIPVQSEGFKSFNKTAGHKLACDAMLDYVIGTEEPEEEHPYS 225

Query: 215 INLIGEYNIDGDYWVLEKYFEDMGINVLSKFTGDATHGELCWMHKAKLSLVRCQRSATYV 274
           IN+IGE+N+ GD W +   +E MG+ V +  TGD+T  ++   H++KL++V+CQ+S+ Y+
Sbjct: 226 INIIGEFNVAGDLWGIIPLYEKMGVKVHTAITGDSTVAKVASAHRSKLNIVQCQKSSNYL 285

Query: 275 AKLIEEKYGVPYLKVDFFGPEYCAENLRAVGKYFGKE---IEAEAVIKKEMEKIQPELDF 331
           A  +E+KYG+P +KV+FFG +   ++LRAV ++FG E      E +IK E++ ++ E+  
Sbjct: 286 AAQMEKKYGIPSIKVNFFGLDETTKSLRAVAEFFGDEEMIKRTEELIKSEIKNLRDEISE 345

Query: 332 YKSKLQGKKIWISAGGPKSWHLSKPIEQYLGMDVVALSGLFEHEDGYEKMQERAKDGTII 391
           YK  L G+ + I +G  KSW L     + L M+++         + Y+++++   +GT+I
Sbjct: 346 YKKDLSGRTVAIYSGAHKSWALVSAFGE-LDMEIIMSGTQNGKPEDYQQIRDHVCEGTLI 404

Query: 392 IDDPNTLEMEEVVEKYQPEIVLGGIKEKYFFHKLGVPSVMIHSYENGPYIGFEGFVNMAR 451
           +DD +++E+ +++++Y+P+I++ G KEKY   K G+P    +      + G++GF+N AR
Sbjct: 405 VDDASSMELVQLLKEYKPDILISGAKEKYLSLKSGIPHCDFNHDRITAFSGYQGFINFAR 464

Query: 452 DIYTAIYNPAWKL 464
            ++TA+  P W+L
Sbjct: 465 VVHTAVMTPIWRL 477