Pairwise Alignments

Query, 417 a.a., APC family permease from Methanococcus maripaludis S2

Subject, 571 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 63.5 bits (153), Expect = 2e-14
 Identities = 68/267 (25%), Positives = 109/267 (40%), Gaps = 27/267 (10%)

Query: 115 NYAFGAEFY-SAVLMLIGGVILSRNISSVGKISMLISTVISTILVVGGLFTILFYRKD-- 171
           +++  A F+  A LML+   I  R I     +   I   +   +V+ GL  IL  + D  
Sbjct: 185 SFSLNASFFVGATLMLVVFAIQHRGIMGTASVQKWIGLSVIIPMVIVGLVPILTGKVDWG 244

Query: 172 ---ALFTGTGISTIDVGY-----------SFLIMFWSIIGWEILGNYSLEVENPEKTIPK 217
               L         D G               I  WS  G+E    Y+ E  NPEK   K
Sbjct: 245 NFSPLVPLAAAGAADPGSWNIPGWTLVLGGLFIAAWSTYGFETAVCYTSEFRNPEKDTFK 304

Query: 218 AALVSVIAMSIVYLIVSGALQVLDIGKLGLIDPI----SGISLILYPLFGQ---YSSIIL 270
           A   S +    ++++V    Q   +G  G++DP     SG++  L  + G      S ++
Sbjct: 305 AIFYSGLLCLALFILVPFTFQGA-LGLSGMLDPAIVDGSGVAQALAHMVGGGKIIESALV 363

Query: 271 SLTITGLCLCSFLMLIGGASRLVYAQAKDGVFPKIFKYRSNTNAPLSAVLLMVFANFLTL 330
            L I  L L S +  + G+SR +Y  A DG  P+   + +   AP  A+   ++ N   L
Sbjct: 364 MLMILALML-SIMTAMAGSSRTLYQGAVDGWLPRFLDHVNEHGAPTRAMWADLWFNLALL 422

Query: 331 FAVYFNLISFNEIIAAVN-AFLITNII 356
                +  SF  ++A  N  ++I N +
Sbjct: 423 AVACADATSFFFVLAVANVGYIIFNFL 449